1YLS Summary
- Structure title
- Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
- Authors
- Serganov, A., Keiper, S., Malinina, L., Tereshko, V., Skripkin, E., Hobartner, C., Polonskaia, A., Phan, A.T., Wombacher, R., Micura, R., Dauter, Z., Jaschke, A., Patel, D.J.
- Release date
- 2005-02-22
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
- 4 RNA chains from unknown source
- 0 other chains
- Nucleic acid compounds
- Other compounds
- RNA Diels-Alder ribozyme, RNA Diels-Alder ribozyme, RNA Diels-Alder ribozyme, RNA Diels-Alder ribozyme
Pairwise Interactions
Interactions annotated by FR3D:- 45 base-pairs
- 109 base-stacking
- 2 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 1YLS contains:- 2 hairpin loops from 1 motif group
- 12 internal loops from 2 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
1YLS has chains which belong to the following equivalence classes in the current representative set:- NR_all_80595.3 (2) rep
- NR_4.0_80595.3 (2) rep
- NR_3.5_80595.3 (2) rep
- NR_3.0_80595.3 (2) rep
- NR_20.0_80595.3 (2) rep