1YLS Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1YLS_001 | 1/B/220:225 | UNCG HL_61337.1 | ||
| HL_1YLS_002 | 1/D/220:225 | UNCG | geometric HL_5J7L_011 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1YLS_001 | 1/A/102:105, 1/B/207:214 | No text annotation IL_09570.1 | ||
| IL_1YLS_011 | 1/B/211:217, 1/B/228:235 | No text annotation IL_49867.1 | ||
| IL_1YLS_006 | 1/C/102:105, 1/D/207:214 | No text annotation | geometric IL_1YLS_001 IL_09570.1 | |
| IL_1YLS_012 | 1/D/211:217, 1/D/228:235 | No text annotation | geometric IL_1YLS_011 IL_49867.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1YLS_002 | Isolated non-canonical cWW pair | ||
| IL_1YLS_003 | Isolated non-canonical cWW pair | ||
| IL_1YLS_004 | Isolated non-canonical cWW pair | ||
| IL_1YLS_005 | Isolated non-canonical cWW pair | ||
| IL_1YLS_007 | Isolated non-canonical cWW pair | ||
| IL_1YLS_008 | Isolated non-canonical cWW pair | ||
| IL_1YLS_009 | Isolated non-canonical cWW pair | ||
| IL_1YLS_010 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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