2BTE Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2BTE_001 | 1/B/12:23 | tRNA D-loop | ||
| HL_2BTE_003 | 1/B/46:47D | GNRA | ||
| HL_2BTE_004 | 1/B/53:61 | T-loop with 2 stacked bulged bases | ||
| HL_2BTE_005 | 1/E/12:23 | tRNA D-loop HL_18470.2 | ||
| HL_2BTE_007 | 1/E/46:47D | GNRA HL_34789.2 | ||
| HL_2BTE_008 | 1/E/53:61 | T-loop with 2 stacked bulged bases HL_33597.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2BTE_002 | No text annotation | ||
| HL_2BTE_006 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_2BTE_001 | 1/B/7:10, 1/B/25:26, 1/B/44:45, 1/B/47:49, 1/B/65:66 | No text annotation | homologous J5_2BTE_002 J5_40900.1 | |
| J5_2BTE_002 | 1/E/7:10, 1/E/25:26, 1/E/44:45, 1/E/47:49, 1/E/65:66 | No text annotation J5_40900.1 |
Problematic loops
No problematic loops
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