2DU6 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2DU6_001 | 1/D/912:922 | No text annotation | geometric HL_2DU3_001 HL_34964.1 | |
| HL_2DU6_004 | 1/D/912:922 | No text annotation | geometric HL_2DU3_001 HL_34964.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2DU6_002 | No text annotation | ||
| HL_2DU6_003 | T-loop with 2 stacked bulged bases | ||
| HL_2DU6_005 | No text annotation | ||
| HL_2DU6_006 | T-loop with 2 stacked bulged bases |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2DU6_003 | 1/D/907:910, 1/D/924:926, 1/D/942:948, 1/D/964:965 | tRNA junction | homologous J4_1U0B_001 J4_40477.2 | |
| J4_2DU6_004 | 1/D/907:910, 1/D/924:926, 1/D/942:948, 1/D/964:965 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_2DU6_001 | No text annotation | ||
| J4_2DU6_002 | No text annotation |
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