2XXA Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2XXA_001 | 1/F/47:52 | No text annotation | homologous HL_4XCO_004 HL_34789.2 | |
| HL_2XXA_002 | 1/G/47:52 | No text annotation | homologous HL_4XCO_004 HL_34789.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2XXA_002 | 1/F/10:12, 1/F/89:93 | Other IL | ||
| IL_2XXA_003 | 1/F/17:18, 1/F/82:84 | Single bulged C | geometric IL_3IVK_001 IL_05642.2 | |
| IL_2XXA_004 | 1/F/19:21, 1/F/78:81 | Isolated cWH basepair | geometric IL_3R1C_012 IL_10892.2 | |
| IL_2XXA_005 | 1/F/26:27, 1/F/71:73 | Single bulged C | geometric IL_7A0S_055 IL_05642.2 | |
| IL_2XXA_006 | 1/F/28:29, 1/F/68:70 | Single stack bend | geometric IL_8P9A_328 IL_15011.2 | |
| IL_2XXA_007 | 1/F/31:37, 1/F/62:66 | UAA/GAN | ||
| IL_2XXA_008 | 1/F/40:45, 1/F/54:59 | tSH-tHW-tHS-cWW | geometric IL_3LQX_002 IL_35186.2 | |
| IL_2XXA_009 | 1/G/10:12, 1/G/89:93 | No text annotation | ||
| IL_2XXA_010 | 1/G/17:18, 1/G/82:84 | Single bulged C | geometric IL_8F5G_002 IL_05642.2 | |
| IL_2XXA_011 | 1/G/19:21, 1/G/78:81 | Isolated cWH basepair | geometric IL_3R1C_012 IL_10892.2 | |
| IL_2XXA_012 | 1/G/26:27, 1/G/71:73 | Single bulged C | geometric IL_7A0S_055 IL_05642.2 | |
| IL_2XXA_013 | 1/G/28:29, 1/G/68:70 | Single stack bend | geometric IL_8P9A_328 IL_15011.2 | |
| IL_2XXA_014 | 1/G/31:37, 1/G/62:66 | No text annotation | ||
| IL_2XXA_015 | 1/G/40:45, 1/G/54:59 | tSH-tHW-tHS-cWW | geometric IL_3LQX_002 IL_35186.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2XXA_001 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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