4OO8 Summary
- Structure title
- Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
- Authors
- Nishimasu, H., Ishitani, R., Nureki, O.
- Release date
- 2014-02-26
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
- Chains
- 2 RNA chains from unknown source
-
2 DNA chains
- 2 other chains
- Nucleic acid compounds
- Other compounds
- RNA (97-MER), RNA (97-MER), DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3'), DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3')
- CRISPR-associated endonuclease Cas9/Csn1, CRISPR-associated endonuclease Cas9/Csn1
Pairwise Interactions
Interactions annotated by FR3D:- 84 base-pairs
- 236 base-stacking
- 2 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4OO8 contains:- 10 hairpin loops from 0 motif groups
- 9 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
4OO8 has chains which belong to the following equivalence classes in the current representative set:- NR_all_56990.2 (2)
- NR_4.0_56990.2 (2)
- NR_3.5_56990.2 (2)
- NR_3.0_56990.2 (2)
- NR_20.0_56990.2 (2)
- NR_2.5_56990.2 (2)