4WJ3 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4WJ3_013 | 1/Q/13:22 | No text annotation | homologous HL_3KFU_004 NA | |
| HL_4WJ3_002 | 1/Q/31:39 | No text annotation | homologous HL_4WJ4_002 HL_50537.6 | |
| HL_4WJ3_003 | 1/Q/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6JXM_003 HL_28252.8 | |
| HL_4WJ3_014 | 1/R/13:22 | No text annotation | homologous HL_3KFU_004 NA | |
| HL_4WJ3_005 | 1/R/31:39 | No text annotation | homologous HL_4WJ4_002 HL_50537.6 | |
| HL_4WJ3_006 | 1/R/53:61 | T-loop with 2 stacked bulged bases | homologous HL_1QTQ_003 HL_28252.8 | |
| HL_4WJ3_015 | 1/S/13:22 | No text annotation | homologous HL_3KFU_004 NA | |
| HL_4WJ3_008 | 1/S/31:39 | No text annotation | homologous HL_4WJ4_002 HL_50537.6 | |
| HL_4WJ3_009 | 1/S/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6JXM_003 HL_28252.8 | |
| HL_4WJ3_016 | 1/T/13:22 | tRNA D-loop | homologous HL_1QF6_001 HL_20811.4 | |
| HL_4WJ3_011 | 1/T/31:39 | No text annotation | homologous HL_4WJ4_002 HL_50537.6 | |
| HL_4WJ3_012 | 1/T/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6JXM_003 HL_28252.8 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4WJ3_001 | No text annotation | ||
| HL_4WJ3_004 | No text annotation | ||
| HL_4WJ3_007 | No text annotation | ||
| HL_4WJ3_010 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_4WJ3_001 | 1/Q/7:10, 1/Q/25:27, 1/Q/43:49, 1/Q/65:66 | No text annotation | homologous J4_7UZ0_001 J4_70449.28 | |
| J4_4WJ3_002 | 1/R/7:10, 1/R/25:27, 1/R/43:49, 1/R/65:66 | No text annotation | homologous J4_7UZ0_001 J4_70449.28 | |
| J4_4WJ3_003 | 1/S/7:10, 1/S/25:27, 1/S/43:49, 1/S/65:66 | tRNA junction | homologous J4_5AXM_001 J4_70449.28 | |
| J4_4WJ3_004 | 1/T/7:10, 1/T/25:27, 1/T/43:49, 1/T/65:66 | No text annotation | homologous J4_7EQJ_002 J4_70449.28 |
Problematic loops
No problematic loops
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