5MGA Summary
- Structure title
- Structure of the Cpf1 endonuclease R-loop complex after DNA cleavage
- Authors
- Release date
- 2017-06-21
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
- 1 RNA chain from Francisella tularensis
-
2 DNA chains
- 1 other chain
- Nucleic acid compounds
- Other compounds
- RNA (40-MER), DNA (26-MER), DNA (5'-D(P*CP*GP*TP*TP*AP*GP*AP*GP*AP*AP*GP*T)-3')
- CRISPR-associated endonuclease Cpf1
Pairwise Interactions
Interactions annotated by FR3D:- 32 base-pairs
- 78 base-stacking
- 2 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5MGA contains:- 1 hairpin loop from 1 motif group
- 5 internal loops from 0 motif groups
- 0 junction loops from 0 motif groups
3D Redundancy
5MGA has chains which belong to the following equivalence classes in the current representative set:- NR_all_92954.1 (1) rep
- NR_4.0_92954.1 (1) rep
- NR_3.5_92954.1 (1) rep
- NR_3.0_92954.1 (1) rep
- NR_20.0_92954.1 (1) rep