5NDI Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5NDI_001 | 1/A/8:13 | Pseudoknot geometry with 3' bulge | geometric HL_5NDI_002 HL_57176.2 | |
| HL_5NDI_002 | 1/B/8:13 | Pseudoknot geometry with 3' bulge HL_57176.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5NDI_003 | Pseudoknot geometry with 3' bulge | ||
| HL_5NDI_004 | Pseudoknot geometry with 3' bulge |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5NDI_001 | No text annotation | ||
| IL_5NDI_002 | Isolated non-canonical cWW pair | ||
| IL_5NDI_003 | Isolated non-canonical cWW pair | ||
| IL_5NDI_004 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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