5O60 Summary
- Structure title
- Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis
- Authors
- Release date
- 2017-07-12
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
- Chains
- 3 RNA chains from Mycolicibacterium smegmatis
- 32 other chains
- Nucleic acid compounds
- Other compounds
- tRNA CCA-end acetylated (Phe), 23S rRNA, 5S rRNA
- 50S ribosomal protein bL37, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L10, 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L32, 50S ribosomal protein L33 1, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 50S ribosomal protein L31
Pairwise Interactions
Interactions annotated by FR3D:- 1,331 base-pairs
- 3,371 base-stacking
- 67 base-phosphate
- 83 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5O60 contains:- 79 hairpin loops from 0 motif groups
- 135 internal loops from 0 motif groups
- 43 junction loops from 0 motif groups
3D Redundancy
5O60 has chains which belong to the following equivalence classes in the current representative set:- NR_all_95119.3 (1)
- NR_all_76090.16 (1)
- NR_all_89181.11 (1)
- NR_4.0_95119.3 (1)
- NR_4.0_76090.16 (1)
- NR_4.0_89181.11 (1)
- NR_3.5_95119.3 (1)
- NR_3.5_76090.16 (1)
- NR_3.5_89181.11 (1)
- NR_20.0_95119.3 (1)
- NR_20.0_76090.16 (1)
- NR_20.0_89181.11 (1)
Similar structures
9J1M 7PWO 4YZV 4YZV 8IP8 8ZTV 6S0K 1VY7 3CD6 4LNT 5GAE 8ZTU 4ZSN 3CMA 4LNT 4L47 1VY7 4L47 5GAG 1KQS 5GAD 7Y38 1VVJ 5GAH 1VVJ 4TUA 4TUD 5LYB 4LFZ 4TUE 3J7Z 4LT8 4LT8 4TUB 4P70 4TUA 6N9E 4TUB 5LYB 4TUD 4TUC 4TUE 4TUC 4LFZ 4P70 4L71 4L71 4V19 4LSK 4LEL 6N9E 3CMA 5GAF 4LSK 4LEL 7PWG 5NCO 4V19 8OIT 8OIR 5LZE 5LZD 5LZC 5LZB 4ZSN 3J5L 8OIQ 8OIN 1VQO 1M90 1QVG 3CXC 1Q7Y 1QVG 1QVG 1Q86 3CME 1Q86 3CME 6OTR 6OTR 6OXI 8FOM 8FOM 8FON 8FON 6NDK 6OXA 6OXA 6NDK 6OXIStructures from NR_all_95119.3