5HC9 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5HC9_001 | 1/C/13:22 | No text annotation | homologous HL_3WFS_001 NA | |
| HL_5HC9_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5AXM_003 HL_33597.4 | |
| HL_5HC9_004 | 1/D/13:22 | No text annotation | homologous HL_3WFS_001 NA | |
| HL_5HC9_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5AXM_003 HL_33597.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5HC9_002 | No text annotation | ||
| HL_5HC9_007 | tRNA anticodon loop | ||
| HL_5HC9_005 | tRNA anticodon loop |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_5HC9_003 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | tRNA junction | homologous J4_4WJ4_001 J4_95067.1 | |
| J4_5HC9_002 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | tRNA junction | homologous J4_6UFG_001 J4_95067.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_5HC9_001 | No text annotation |
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