RNA 3D Hub //

6AHU Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6AHU_0021/A/105:111No text annotation
HL_6AHU_0031/A/122:128No text annotation
HL_6AHU_0081/T/53:61T-loop with 2 stacked bulged bases
homologous
HL_4LCK_003
HL_33597.4

Problematic loops

#loop idProblemSequence
HL_6AHU_001No text annotation
HL_6AHU_004No text annotation
HL_6AHU_005No text annotation
HL_6AHU_009tRNA D-loop
HL_6AHU_006No text annotation
HL_6AHU_007tRNA anticodon loop

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6AHU_0011/A/2:4,
1/A/338:339		No text annotation
IL_6AHU_0021/A/12:15,
1/A/327:330		No text annotation
IL_6AHU_0031/A/29:30,
1/A/66:68		No text annotation
IL_6AHU_0171/A/30:39,
1/A/57:66		No text annotation
IL_6AHU_0061/A/141:155,
1/A/240:249		No text annotation
IL_6AHU_0141/A/277:284,
1/A/309:313		No text annotation

Problematic loops

#loop idProblemSequence
IL_6AHU_016No text annotation
IL_6AHU_004No text annotation
IL_6AHU_005No text annotation
IL_6AHU_007No text annotation
IL_6AHU_018No text annotation
IL_6AHU_008No text annotation
IL_6AHU_019No text annotation
IL_6AHU_009No text annotation
IL_6AHU_010No text annotation
IL_6AHU_011No text annotation
IL_6AHU_012No text annotation
IL_6AHU_013No text annotation
IL_6AHU_015No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6AHU_0031/A/16:26,
1/A/71:81,
1/A/321:326		No text annotation
J3_6AHU_0021/A/85:91,
1/A/259:277,
1/A/313:317		No text annotation
J4_6AHU_0011/A/94:101,
1/A/115:116,
1/A/134:135,
1/A/255:256		No text annotation

Problematic loops

#loop idProblemSequence
J3_6AHU_001No text annotation
J4_6AHU_003tRNA junction
J4_6AHU_002No text annotation

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