6HMO Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6HMO_001 | 1/A/1:3, 1/B/20:22 | No text annotation | ||
| IL_6HMO_003 | 1/A/8:9, 1/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_005 | 2/A/8:9, 2/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_007 | 3/A/8:9, 3/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_009 | 4/A/8:9, 4/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_011 | 5/A/8:9, 5/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_013 | 6/A/8:9, 6/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_015 | 7/A/8:9, 7/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_017 | 8/A/8:9, 8/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_019 | 9/A/8:9, 9/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_020 | 10/A/1:3, 10/B/20:22 | No text annotation | ||
| IL_6HMO_022 | 10/A/8:9, 10/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_024 | 11/A/8:9, 11/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_026 | 12/A/8:9, 12/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_028 | 13/A/8:9, 13/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_030 | 14/A/8:9, 14/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_032 | 15/A/8:9, 15/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_034 | 16/A/8:9, 16/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_036 | 17/A/8:9, 17/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_037 | 18/A/1:3, 18/B/20:22 | No text annotation | ||
| IL_6HMO_039 | 18/A/8:9, 18/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_041 | 19/A/8:9, 19/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 | |
| IL_6HMO_043 | 20/A/8:9, 20/B/13:15 | Single stack bend | geometric IL_7A0S_005 IL_15011.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6HMO_002 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_004 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_006 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_008 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_010 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_012 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_014 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_016 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_018 | No text annotation | ||
| IL_6HMO_021 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_023 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_025 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_027 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_029 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_031 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_033 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_035 | No text annotation | ||
| IL_6HMO_038 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_040 | Tandem non-canonical cWW pairs | ||
| IL_6HMO_042 | Tandem non-canonical cWW pairs |
Valid loops
No loops found
Problematic loops
No problematic loops
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