6JQ5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6JQ5_001 | 1/A/6:14 | T-loop with 2 stacked bulged bases HL_28252.6 | ||
| HL_6JQ5_002 | 1/A/45:50 | GNRA HL_37824.7 | ||
| HL_6JQ5_003 | 1/B/6:14 | T-loop with 2 stacked bulged bases HL_28252.6 | ||
| HL_6JQ5_004 | 1/B/45:50 | GNRA HL_37824.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6JQ5_001 | 1/A/31:32, 1/A/62:64 | Stack outside cWW IL_00225.13 | ||
| IL_6JQ5_002 | 1/A/34:36, 1/A/58:60 | Multiple bulged bases IL_42771.1 | ||
| IL_6JQ5_003 | 1/A/38:40, 1/A/55:56 | Single bulged U IL_89505.4 | ||
| IL_6JQ5_004 | 1/B/31:32, 1/B/62:64 | Major groove intercalation IL_00225.13 | ||
| IL_6JQ5_005 | 1/B/34:36, 1/B/58:60 | Multiple bulged bases IL_42771.1 | ||
| IL_6JQ5_006 | 1/B/38:40, 1/B/55:56 | Single bulged U IL_89505.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6JQ5_001 | 1/A/27:31, 1/A/64:67, 1/B/70:77 | No text annotation J3_88257.1 | ||
| J3_6JQ5_002 | 1/A/70:77, 1/B/27:31, 1/B/64:67 | No text annotation J3_45482.1 |
Problematic loops
No problematic loops
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