- Structure title
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)
- Authors
- Release date
- 2020-09-16
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
- Chains
-
3 RNA chains from
Saccharomyces cerevisiae
-
55 other chains
- Nucleic acid compounds
U3 snoRNA, 5' ETS, 18S pre-rRNA
- Other compounds
rRNA 2'-O-methyltransferase fibrillarin, rRNA 2'-O-methyltransferase fibrillarin, Nucleolar protein 56, Nucleolar protein 58, Ribosomal RNA-processing protein 9, 13 kDa ribonucleoprotein-associated protein, 13 kDa ribonucleoprotein-associated protein, Bud site selection protein 21, U3 small nucleolar RNA-associated protein 7, U3 small nucleolar RNA-associated protein 11, U3 small nucleolar RNA-associated protein MPP10, U3 small nucleolar ribonucleoprotein protein IMP3, U3 small nucleolar ribonucleoprotein protein IMP4, Something about silencing protein 10, Protein SOF1, rRNA-processing protein FCF2, rRNA-processing protein FCF1, U3 small nucleolar RNA-associated protein 4, U3 small nucleolar RNA-associated protein 5, U3 small nucleolar RNA-associated protein 8, U3 small nucleolar RNA-associated protein 9, U3 small nucleolar RNA-associated protein 10, U3 small nucleolar RNA-associated protein 15, NET1-associated nuclear protein 1, Periodic tryptophan protein 2, U3 small nucleolar RNA-associated protein 12, U3 small nucleolar RNA-associated protein 13, U3 small nucleolar RNA-associated protein 6, U3 small nucleolar RNA-associated protein 18, U3 small nucleolar RNA-associated protein 21, Ribosome biogenesis protein ENP2, U3 small nucleolar ribonucleoprotein protein LCP5, Ribosomal RNA small subunit methyltransferase NEP1, Ribosomal RNA small subunit methyltransferase NEP1, Ribosome biogenesis protein BMS1, RNA 3'-terminal phosphate cyclase-like protein, RNA cytidine acetyltransferase, RNA cytidine acetyltransferase, Nucleolar complex protein 14, Nucleolar complex protein 4, U3 small nucleolar RNA-associated protein 20, U3 small nucleolar RNA-associated protein 14, Essential nuclear protein 1, Protein BFR2, 40S ribosomal protein S4-A, 40S ribosomal protein S5, 40S ribosomal protein S6-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S11-A, 40S ribosomal protein S16-A, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, 40S ribosomal protein S28-A, Unassigned helices
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 6LQV contains:
-
24 hairpin loops from 0 motif groups
-
52 internal loops from 0 motif groups
-
9 junction loops from 0 motif groups
More
3D Redundancy
6LQV has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
