6W6L Summary
- Structure title
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Authors
- Release date
- 2020-09-02
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
- Chains
- 5 RNA chains from Homo sapiens
- 49 other chains
- Nucleic acid compounds
- Other compounds
- 5.8S ribosomal RNA, 5S ribosomal RNA, 28S ribosomal RNA, tRNA, tRNA
- Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta, Transmembrane protein 147, Nicalin, Calcium load-activated calcium channel, Coiled-coil domain-containing protein 47, 60S ribosomal protein L8, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, 60S ribosomal protein L41, 60S ribosomal protein L36a, 60S ribosomal protein L37a, 60S ribosomal protein L28, Nascent chain mixture
Pairwise Interactions
Interactions annotated by FR3D:- 1,291 base-pairs
- 3,916 base-stacking
- 163 base-phosphate
- 205 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6W6L contains:- 89 hairpin loops from 0 motif groups
- 181 internal loops from 0 motif groups
- 53 junction loops from 0 motif groups
3D Redundancy
6W6L has chains which belong to the following equivalence classes in the current representative set:- NR_all_17351.5 (1)
- NR_all_65061.43 (1)
- NR_all_52752.39 (1)
- NR_all_28207.5 (1)
- NR_4.0_17351.5 (1)
- NR_4.0_65061.43 (1)
- NR_4.0_52752.39 (1)
- NR_4.0_28207.5 (1)
- NR_20.0_17351.5 (1)
- NR_20.0_65061.43 (1)
- NR_20.0_52752.39 (1)
- NR_20.0_28207.5 (1)
Similar structures
8QYX 8GLP 9C3H 8A3D 8QFD 8YOO 8QOI 8JDK 8G5Y 8YOP 8JDJ 8JDL 8K2C 9GUL 8XSX 7XNY 8G60 6ZMI 8FLE 8JDM 7OW7 7XNX 8G5Z 9B0H 9B0G 8FLB 8IFD 8FL7 8FLD 8UJB 9B0W 8FLF 6ZM7 8FL6 8FLA 8IFE 8OJ5 7F5S 9B11 6Y6X 8UJC 9AZS 8FLC 8FL9 9B0F 8G6J 9B0J 9B0O 9B0R 8FL3 9B0P 8G61 6QZP 8FL2 9GMO 6ZME 8XSY 9B0N 8UJD 6ZMO 9GY4 8Y0X 8OHD 6LQM 6OLE 9AZN 8UIZ 6Y2L 8UIK 8Y0W 6OM0 6XA1 8IDT 6Z6M 7QVP 8FL4 9G8M 8XSZ 6LSR 8UKB 6LU8 8UIY 6Y0G 8OJ8 7QVP 8OJ0 8INF 6LSS 8IDY 7BHP 9B0S 6Y57 9B0Q 6OLI 4UG0 9QIW 8UJ9 8UJJ 8UJK 8INE 5T2C 9B0Q 8RL2 8FL0 6OLG 9B0S 6IP5 5LKS 6IP8 6OLF 6OLZ 8IE3 8INK 8IPY 8IPD 6OM7 8IR1 4V6X 8IR3 6IP6 9AZC 8IPX 5AJ0 6Z6N 6Z6LStructures from NR_all_52752.39