- Structure title
- Specific features and methylation sites of a plant 80S ribosome
- Authors
- Cottilli, P., Itoh, Y., Amunts, A.
- Release date
- 2022-08-03
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
- Chains
-
7 RNA chains from
Solanum lycopersicum
-
73 other chains
- Nucleic acid compounds
25S rRNA, 5S rRNA, 5.8S rRNA, 18S, tRNA_1, mRNA, tRNA
- Other compounds
40S ribosomal protein S17, 40S ribosomal protein S21, 40S body ribosomal protein uS12, 60S ribosomal protein L8, 40S ribosomal protein S26, Ribosomal protein L3, S5 DRBM domain-containing protein, Ribos_L4_asso_C domain-containing protein, 40S ribosomal protein S6, Ribosomal_L18_c domain-containing protein, 40S body ribosomal protein uS4, Ribosomal_L6e_N domain-containing protein, 30S ribosomal protein S15, chloroplastic, Thaliana 60S ribosomal protein L7, Ribosomal protein S14, Ribosomal_L7Ae domain-containing protein, 40S ribosomal protein S15a-1, 60S ribosomal protein uL6, 40S ribosomal protein S24, 60S ribosomal protein L10, 40S ribosomal protein S27, 60S ribosomal protein uL5, 40S ribosomal protein S30, 60S ribosomal protein L13, KH type-2 domain-containing protein, Ribosomal_L14e domain-containing protein, Ribosomal_S7 domain-containing protein, Ribosomal protein L15, S10_plectin domain-containing protein, Pectinesterase, 40S ribosomal protein uS19, 50S ribosomal protein L22, chloroplastic, 40S ribosomal protein uS9, Ribosomal_L18e/L15P domain-containing protein, Ribosomal protein L19, 40S ribosomal protein uS13, 60S ribosomal protein L18a, 40S ribosomal protein eS19, 60S ribosomal protein eL21, Ribosomal_S10 domain-containing protein, 60S ribosomal protein eL22, 40S ribosomal protein eS28, 60S ribosomal protein uL14, 40S ribosomal protein uS14, TRASH domain-containing protein, Mitogen-activated protein kinase, Ribosomal_L23eN domain-containing protein, 40S ribosomal protein S25, KOW domain-containing protein, 60S ribosomal protein L27, Ribosomal_L18e/L15P domain-containing protein, 60S ribosomal protein L29, 60S ribosomal protein eL30, 60S ribosomal protein eL31, 60S ribosomal protein eL32, 60S ribosomal protein eL33, 60S ribosomal protein eL34, Similar to 60S ribosomal protein L35, 60S ribosomal protein L36, Ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein eL39, Ubiquitin, 60S ribosomal protein eL42, 60S ribosomal protein eL43, Ribosomal_L28e domain-containing protein, 60S ribosomal protein L41, 40S ribosomal protein SA, 40S ribosomal protein S3a, 40S ribosomal protein S4, 40S ribosomal protein S7, 40S ribosomal protein S8, Ribosomal_S17_N domain-containing protein
Pairwise Interactions
Interactions annotated by
FR3D:
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RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 7QIZ contains:
-
120 hairpin loops from 0 motif groups
-
306 internal loops from 0 motif groups
-
75 junction loops from 0 motif groups
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3D Redundancy
7QIZ has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
