8G61 Summary
- Structure title
- mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)
- Authors
- Holm, M., Natchiar, K.S., Rundlet, E.J., Myasnikov, A.G., Altman, R.B., Blanchard, S.C.
- Release date
- 2023-04-19
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
- Chains
- 7 RNA chains from Escherichia coli, Homo sapiens
- 77 other chains
- Nucleic acid compounds
- Other compounds
- A-site tRNA, 28S rRNA, 5S rRNA, 5.8S rRNA, RNA (77-MER), 18S rRNA, mRNA
- eIF5A1, uL2, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, eL40, 60S ribosomal protein L41, 60S ribosomal protein L36a, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S ribosomal protein L10a, 40S ribosomal protein SA, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, X isoform, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S15a, uS12, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, FAU ubiquitin-like and ribosomal protein S30, Ubiquitin-40S ribosomal protein S27a, Receptor of activated protein C kinase 1
Pairwise Interactions
Interactions annotated by FR3D:- 2,209 base-pairs
- 5,906 base-stacking
- 106 base-phosphate
- 141 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8G61 contains:- 134 hairpin loops from 0 motif groups
- 347 internal loops from 0 motif groups
- 78 junction loops from 0 motif groups
3D Redundancy
8G61 has chains which belong to the following equivalence classes in the current representative set:- NR_all_35542.151 (1)
- NR_all_19951.92 (1)
- NR_all_65061.41 (1)
- NR_all_52752.37 (1)
- NR_all_46995.50 (1)
- NR_4.0_35542.151 (1)
- NR_4.0_19951.92 (1)
- NR_4.0_65061.41 (1)
- NR_4.0_52752.37 (1)
- NR_4.0_46995.50 (1)
- NR_3.5_35542.151 (1)
- NR_3.5_19951.92 (1)
- NR_3.5_65061.41 (1)
- NR_3.5_52752.37 (1)
- NR_3.5_46995.50 (1)
- NR_3.0_35542.151 (1)
- NR_3.0_19951.92 (1)
- NR_3.0_65061.41 (1)
- NR_3.0_52752.37 (1)
- NR_3.0_46995.50 (1)
- NR_20.0_35542.151 (1)
- NR_20.0_19951.92 (1)
- NR_20.0_65061.41 (1)
- NR_20.0_52752.37 (1)
- NR_20.0_46995.50 (1)
Similar structures
4YCO 4YCO 4YCO 9D7R 9D7T 9DFC 9D7S 9DFD 3FOZ 9D7R 9D7T 4WOI 9DFC 9D7S 5NDK 4V9H 6QNR 8VTU 3L0U 9DFD 2ZM5 8UD7 7AZO 7AZO 5NDK 8G2C 6QNR 4V5R 8UD8 4V9D 4V5R 8G2C 4V5P 4V5P 8UVR 8UD8 4WQU 4W2E 8G2B 2ZXU 8UD7 4WQF 4V6F 9D0J 6CFJ 5J4B 8VTV 5NDJ 6XHY 8VTU 5NDJ 4V5S 8G2A 9D0J 7RQ8 8G2B 8UD8 5WIT 8UD8 8G29 6CFJ 8UD6 4V5Q 8G2B 5W4K 5J4C 4V5S 4V5E 8UD6 8VTX 6C5L 6CFJ 8UD7 8VTX 8EV7 5J4C 5WIS 8EV7 6XHW 8G29 8CVK 4V5E 9D7R 4V5J 4WQU 9D7S 5WIS 4V5Q 6XHV 5J4B 8UD7 6C5L 6XHY 8G2A 8UVR 5J4C 7AZS 6CFJ 4WT1 5J4B 4V6F 8VTV 6Y3G 5VP2 9O3L 8UVR 5W4K 8G2B 7AZS 4V5D 8CVJ 5VP2 5J4B 7RQ9 4W2G 5J4C 9O3L 8UD6 8G2D 4V5D 4WQF 6XHW 7RQ8 6ND5 6XHV 5WIT 8CVK 9D0J 8UVS 5NDK 4V5J 8CVL 4V51 4WT1 9D7T 8UVR 4V9C 8EV7 8G2D 7AZO 9D0J 9O3L 8EV6 5WIS 5DOY 7RQ9 7RQ9 8UD6 7RQ8 5NDK 4Y4P 4WOI 4WSD 8CVJ 4WQR 5W4K 7AZO 4Z3S 2ZM5 5DOY 9O3L 6ND5 4W2I 8CVL 8UVS 8EV7 1VY7 5W4K 4Z3S 1VY4 5DOY 9D7R 4V9D 8G2D 4W2I 5VP2 7RQ9 4WSD 8EV6 4Z3S 4WRO 8EV6 4Y4P 6ND5 4WPO 4WT1 5VP2 6UO1 4Y4P 4V5S 4W2F 4W2I 7AZO 4Z3S 4V51 4W2G 4V6F 4WSD 6UO1 6UO1 4WQR 8G2D 4V5S 1VY4 7AZO 9D7S 9DFC 6QNR 6UO1 5WIS 4V5D 4W2G 4V5L 4WZO 6XHY 4V5D 1VY7 5NDJ 7RQ8 4WT1 4W2I 4WPO 8UVS 4V5D 9DFC 4V5E 4V5J 6QNR 5NDJ 6QNR 8EV6 9D7T 2ZXU 6ND5 9DFD 4V5G 4Y4P 8G2C 4WQR 4V5D 4V5J 4W2G 1VY5 6QNR 5WIT 4WZO 4V5G 4V5Q 4W2F 5DOY 4V5Q 6QNR 9B00 4W2F 4V6F 5NDK 5WIT 8G2A 5NDJ 4WSD 4V5G 6XHV 9DFD 4WRO 4WRO 6C5L 6C5L 8VTX 4WPO 8G29 4V6F 6XHY 8G2C 6XHW 1VY4 5NDK 4V5C 4W2F 8G2A 4V5G 8VTX 4WRO 4V5P 7AZS 8VTV 8UVS 4V5R 8CVJ 4V5C 1VY4 9B00 4V5C 8G29 7AZS 4V6F 6XHW 7AZS 4V5R 7AZS 1VY5 4V97 8VTU 9B00 4V5P 8VTV 5NDJ 6XHV 8CVJ 6UCQ 4V5A 4P6F 8VTU 9B00 7AZO 4V5A 4V5E 7LH5 8CVK 7LH5 4V4I 1VY5 6Y4B 4V97 7AZS 8CVK 8CVL 4W2H 4P6F 4WQR 4V8J 4V5C 6UCQ 4WPO 4V97 8CVL 1VY5 4V9I 4V9I 4V97 4V5L 4W2H 4V9C 4V8J 4WQU 6UCQ 4V8J 4W2E 4V4Y 4WQU 4V4Y 4WQF 6UCQ 4WQF 4V4Y 6ZTN 6ZTL 8G6W 8AKN 7N1P 7S1K 8IFB 7S1I 7S1G 7N2U 8G6X 7UG7 6YSS 8G5Z 8G6Y 7N30 7N31 7N2C 8EKC 6AZ1 6AZ1 8FZH 5AFI 8IFC 8SYL 8FZH 8SYL 8FZE 6WDE 5WFS 5WDT 8UU5 8FZE 8FZJ 8QFS 7AC7 7Q4K 8FZG 6YSR 8FZD 7PJY 7PJV 9GFT 5WE4 8UU8 8FZG 8FZI 8UU9 8FZD 9GR1 6WDD 9GGR 5UYM 6YST 5UQ8 7ABZ 8UU7 8FZF 6WNW 8PEG 6WDG 8UU6 6WDF 6VWL 5WFK 5WE6 7QGN 3JCE 8QHC 6BU8 5UQ7 6WD5 6WD3 5UYL 6WD2 6WDK 6WDM 5WF0 5IQR 6VWM 6VWN 6WD6 6WD8 6WD9 6WDL 6WD4 6WDJ 6YSU 8R3V 6WDA 5IQR 6O9J 5UYK 5OT7 6WD7 5KPX 5KPW 8RCL 7PJW 7QG8 6Q95 6WDI 6WDB 3JCE 8RCM 5KPV 6WDC 6WDH 3JCD 7QGH 3JCD 8RCS 7QGR 8RCT 7PJZ 7PJT 7PJX 3JBV 4V69 4V7D 4V7D 4V7C 4V7C 4V6K 4V6K 7PJU 3J46 4V6L 4V6LStructures from NR_all_19951.92