RNA 3D Hub //

8I0S Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8I0S_0011/B/37:45No text annotation
HL_8I0S_0041/F/64:70GNRA
homologous
HL_6ASO_001
HL_34789.6

Problematic loops

#loop idProblemSequence
HL_8I0S_002No text annotation
HL_8I0S_003No text annotation
HL_8I0S_005No text annotation
HL_8I0S_006No text annotation
HL_8I0S_007No text annotation
HL_8I0S_008No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8I0S_0021/B/19:24,
1/B/56:58		No text annotation
IL_8I0S_0031/B/24:28,
1/B/54:56		No text annotation
IL_8I0S_0041/B/35:37,
1/B/45:47		No text annotation
IL_8I0S_0191/F/52:53,
1/H/22:25		Multiple bulged bases
geometric
IL_1KXK_003
NA
IL_8I0S_0091/F/61:62,
1/F/72:75		Multiple bulged bases
geometric
IL_7RQB_098
NA

Problematic loops

#loop idProblemSequence
IL_8I0S_001No text annotation
IL_8I0S_005Single bulged C
IL_8I0S_006No text annotation
IL_8I0S_018No text annotation
IL_8I0S_007No text annotation
IL_8I0S_008Isolated non-canonical cWW pair
IL_8I0S_020No text annotation
IL_8I0S_021Isolated non-canonical cWW pair
IL_8I0S_022Isolated non-canonical cWW pair
IL_8I0S_010No text annotation
IL_8I0S_011No text annotation
IL_8I0S_012No text annotation
IL_8I0S_013No text annotation
IL_8I0S_023No text annotation
IL_8I0S_014No text annotation
IL_8I0S_015No text annotation
IL_8I0S_016No text annotation
IL_8I0S_017No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8I0S_0011/F/55:57,
1/F/78:84,
1/H/15:20		No text annotation

Problematic loops

No problematic loops


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