8UXA Summary
- Structure title
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Authors
- Yu, Z., Zheng, F., Zhou, C.
- Release date
- 2025-11-19
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
- Chains
- 4 RNA chains from Saccharomyces cerevisiae
- 72 other chains
- Nucleic acid compounds
- Other compounds
- Large ribosomal subunit rRNA, Small ribosomal subunit rRNA, Small ribosomal subunit tRNA, mRNA
- Large ribosomal subunit protein bL36m, Large ribosomal subunit protein mL38, Large ribosomal subunit protein mL40, Large ribosomal subunit protein mL41, Large ribosomal subunit protein mL43, Large ribosomal subunit protein mL44, Large ribosomal subunit protein mL46, Large ribosomal subunit protein mL49, Large ribosomal subunit protein mL50, Large ribosomal subunit protein mL57, Small ribosomal subunit protein mS38, Small ribosomal subunit protein mS41, Small ribosomal subunit protein mS42, 37S ribosomal protein MRP1, mitochondrial, 37S ribosomal protein MRP13, mitochondrial, Small ribosomal subunit protein mS45, Small ribosomal subunit protein mS23, Small ribosomal subunit protein mS26, Small ribosomal subunit protein mS29, Small ribosomal subunit protein mS33, Small ribosomal subunit protein mS35, Large ribosomal subunit protein uL2m, Large ribosomal subunit protein uL3m, Large ribosomal subunit protein uL4m, Large ribosomal subunit protein uL5m, Large ribosomal subunit protein uL6m, Large ribosomal subunit protein bL9m, Large ribosomal subunit protein uL13m, Large ribosomal subunit protein uL14m, Large ribosomal subunit protein uL15m, Large ribosomal subunit protein uL16m, Large ribosomal subunit protein bL17m, Large ribosomal subunit protein bL19m, Large ribosomal subunit protein bL21m, Large ribosomal subunit protein uL22m, Large ribosomal subunit protein uL23m, Large ribosomal subunit protein uL24m, Large ribosomal subunit protein bL27m, Large ribosomal subunit protein bL28m, Large ribosomal subunit protein uL29m, Large ribosomal subunit protein uL30m, Large ribosomal subunit protein bL31m, Large ribosomal subunit protein bL32m, Large ribosomal subunit protein bL33m, Large ribosomal subunit protein bL34m, Small ribosomal subunit protein mS37, Large ribosomal subunit protein mL58, Large ribosomal subunit protein mL59, Large ribosomal subunit protein mL60, Large ribosomal subunit protein mL67, Large ribosomal subunit protein uL10m, Large ribosomal subunit protein uL11m, 37S ribosomal protein MRP51, mitochondrial, Small ribosomal subunit protein uS2m, Ribosomal protein VAR1, mitochondrial, 37S ribosomal protein NAM9, mitochondrial, Small ribosomal subunit protein uS5m, 37S ribosomal protein MRP17, mitochondrial, Small ribosomal subunit protein uS7m, 37S ribosomal protein S8, mitochondrial, Small ribosomal subunit protein uS9m, Small ribosomal subunit protein uS10m, Small ribosomal subunit protein uS11m, Small ribosomal subunit protein uS12m, Small ribosomal subunit protein uS13m, 37S ribosomal protein MRP2, mitochondrial, Small ribosomal subunit protein uS15m, Small ribosomal subunit protein bS16m, 37S ribosomal protein S17, mitochondrial, Small ribosomal subunit protein bS18m, Small ribosomal subunit protein uS19m, Small ribosomal subunit protein bS21m
Pairwise Interactions
Interactions annotated by FR3D:- 1,469 base-pairs
- 4,288 base-stacking
- 181 base-phosphate
- 283 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8UXA contains:- 77 hairpin loops from 0 motif groups
- 148 internal loops from 0 motif groups
- 49 junction loops from 0 motif groups
3D Redundancy
8UXA has chains which belong to the following equivalence classes in the current representative set:- NR_all_08470.5 (1)
- NR_all_67193.8 (1)
- NR_all_20468.1 (1) rep
- NR_all_56234.1 (1) rep
- NR_4.0_08470.5 (1)
- NR_4.0_67193.8 (1)
- NR_4.0_20468.1 (1) rep
- NR_4.0_56234.1 (1) rep
- NR_3.5_08470.5 (1)
- NR_3.5_67193.8 (1)
- NR_3.5_20468.1 (1) rep
- NR_3.5_56234.1 (1) rep
- NR_20.0_08470.5 (1)
- NR_20.0_67193.8 (1)
- NR_20.0_20468.1 (1) rep
- NR_20.0_56234.1 (1) rep