8XT3 Summary
- Structure title
- Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline
- Authors
- Li, X., Wang, M., Cheng, J.
- Release date
- 2024-07-10
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
- Chains
- 2 RNA chains from Homo sapiens
- 50 other chains
- Nucleic acid compounds
- Other compounds
- 16s rRNA, Val tRNA
- Large ribosomal subunit protein mL53, Large ribosomal subunit protein mL54, Large ribosomal subunit protein mL55, Large ribosomal subunit protein mL63, Large ribosomal subunit protein mL62, Large ribosomal subunit protein mL64, Large ribosomal subunit protein uL2m, Large ribosomal subunit protein uL3m, Large ribosomal subunit protein uL4m, Large ribosomal subunit protein bL9m, Large ribosomal subunit protein uL10m, Large ribosomal subunit protein uL11m, Large ribosomal subunit protein uL13m, Large ribosomal subunit protein uL14m, Large ribosomal subunit protein uL15m, Large ribosomal subunit protein uL16m, Large ribosomal subunit protein bL17m, Mitochondrial ribosomal protein L18, isoform CRA_b, Large ribosomal subunit protein bL19m, Large ribosomal subunit protein bL20m, Large ribosomal subunit protein bL21m, 39S ribosomal protein L22, mitochondrial, Large ribosomal subunit protein uL23m, Large ribosomal subunit protein uL24m, Large ribosomal subunit protein bL27m, Large ribosomal subunit protein bL28m, Large ribosomal subunit protein uL30m, Large ribosomal subunit protein bL32m, Large ribosomal subunit protein bL33m, Large ribosomal subunit protein bL34m, Large ribosomal subunit protein bL35m, Large ribosomal subunit protein bL36m, Large ribosomal subunit protein mL37, Large ribosomal subunit protein mL38, Large ribosomal subunit protein mL39, Large ribosomal subunit protein mL40, Large ribosomal subunit protein mL41, Large ribosomal subunit protein mL42, Large ribosomal subunit protein mL43, Large ribosomal subunit protein mL44, Large ribosomal subunit protein mL45, Large ribosomal subunit protein mL46, Large ribosomal subunit protein uL29m, Large ribosomal subunit protein mL48, Large ribosomal subunit protein mL49, Large ribosomal subunit protein mL50, Large ribosomal subunit protein mL51, 39S ribosomal protein L52, mitochondrial, Large ribosomal subunit protein mL66, Large ribosomal subunit protein mL65
Pairwise Interactions
Interactions annotated by FR3D:- 540 base-pairs
- 1,483 base-stacking
- 79 base-phosphate
- 76 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8XT3 contains:- 43 hairpin loops from 0 motif groups
- 57 internal loops from 0 motif groups
- 19 junction loops from 0 motif groups
3D Redundancy
8XT3 has chains which belong to the following equivalence classes in the current representative set:- NR_all_12763.34 (1)
- NR_all_73428.28 (1)
- NR_4.0_12763.34 (1)
- NR_4.0_73428.28 (1)
- NR_3.5_12763.34 (1)
- NR_3.5_73428.28 (1)
- NR_20.0_12763.34 (1)
- NR_20.0_73428.28 (1)
Similar structures
7QI4 8RRI 7QI5 9OLF 7OF0 8ANY 8K2A 7OF6 7OF7 7OF4 7OF2 7QI6 7OF3 9CN3 9PR4 9PGL 7OF5 9PRA 9PGF 9PSM 8OIT 9UWH 8XT0 8XT1 9PGI 9PG8 8XT2 8OIR 9PS7 8QSJ 7ODS 7ODT 9PGM 7PO4 7L20 9PSI 7QH7 6ZSC 8K2B 7OIE 9PRX 7OIA 6ZSD 9PRQ 9PRD 7A5I 7OID 7L08 7OI8 7OG4 8PK0 7OIB 6ZSG 6ZSA 7QH6 6ZS9 6VMI 6VLZ 3J7Y 7OI9 9PS0 3J9M 8QU1 6I9R 7OI7 6ZSB 5OOL 6NU2 7A5G 7A5F 5OOM 6ZSE 6NU3 7OI6 8QU5 6ZM6 6ZM5 7ODR 7O9M 7O9K 7OIC 7A5J 7A5H 7A5K 7PD3Structures from NR_all_12763.34