RNA 3D Hub //

9B11 Summary

View in PDB or NAKB
Circular diagram PDF
Structure title
In situ human unrotated hibernating without CCDC124 state 80S ribosome
Authors
Wei, Z., Yong, X.
Release date
2025-04-30
Experimental technique
ELECTRON MICROSCOPY
Resolution
2.8 Å
Chains
5 RNA chains from Homo sapiens
79 other chains
Nucleic acid compounds
E site tRNA, 28S rRNA, 5S rRNA, 5.8S rRNA, 18S rRNA
Other compounds
eEF2, 60S ribosomal protein L8, Large ribosomal subunit protein uL3, 60S ribosomal protein L4, Large ribosomal subunit protein uL18, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10-like, 60S ribosomal protein L11, Large ribosomal subunit protein eL13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, Heparin-binding protein HBp15, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, Large ribosomal subunit protein eL40, 60S ribosomal protein L41, 60S ribosomal protein L36a, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S acidic ribosomal protein P0, 60S ribosomal protein L12, 60S ribosomal protein L10a, 40S ribosomal protein SA, 40S ribosomal protein S3a, 40S ribosomal protein S2, Small ribosomal subunit protein uS3, Small ribosomal subunit protein eS4, X isoform, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, Small ribosomal subunit protein eS12, 40S ribosomal protein S13, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS19, Small ribosomal subunit protein uS9, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S15a, 40S ribosomal protein S23, 40S ribosomal protein S24, Small ribosomal subunit protein eS25, 40S ribosomal protein S26, Small ribosomal subunit protein eS27, 40S ribosomal protein S28, 40S ribosomal protein S29, Small ribosomal subunit protein eS30, Ubiquitin-40S ribosomal protein S27a, Receptor of activated protein C kinase 1

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 9B11 contains:
  • 122 hairpin loops from 0 motif groups
  • 282 internal loops from 0 motif groups
  • 69 junction loops from 0 motif groups
More

3D Redundancy

9B11 has chains which belong to the following equivalence classes in the current representative set:

Similar structures

9B0G 9B0H 9B0W 9B0F 9DPL 9AZS 9B0R 9B0P 9B0J 9AZN 9DPA 9DPB 9B0Q 9B0Q 9DOW 8UIZ 9B0S 9B0S 8D9K 8D9L
Structures from NR_all_05364.4
Copyright 2025 BGSU RNA group. Page generated in 1.2822 s