- Structure title
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) and hygromycin B
- Authors
- Zhao, Y., Li, H.
- Release date
- 2026-05-20
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
- Chains
-
5 RNA chains from
Saccharomyces cerevisiae, Taura syndrome virus
-
75 other chains
- Nucleic acid compounds
25S rRNA, 5S rRNA, 5.8S rRNA, 18S rRNA, TSV IRES RNA
- Other compounds
60S ribosomal protein L2-A, 60S ribosomal protein L3, Large ribosomal subunit protein uL4A, Large ribosomal subunit protein uL18, 60S ribosomal protein L6-A, 60S ribosomal protein L7-A, 60S ribosomal protein L8-A, 60S ribosomal protein L9-A, Large ribosomal subunit protein uL16, Large ribosomal subunit protein uL5A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, 60S ribosomal protein L15-A, 60S ribosomal protein L16-A, 60S ribosomal protein L17-A, 60S ribosomal protein L18-A, 60S ribosomal protein L19-A, 60S ribosomal protein L20, 60S ribosomal protein L21-A, 60S ribosomal protein L22-A, 60S ribosomal protein L23-A, Large ribosomal subunit protein eL24A, 60S ribosomal protein L25, 60S ribosomal protein L26-A, 60S ribosomal protein L27-A, 60S ribosomal protein L28, Large ribosomal subunit protein eL29, 60S ribosomal protein L30, 60S ribosomal protein L31-A, Large ribosomal subunit protein eL32, 60S ribosomal protein L33-A, 60S ribosomal protein L34-A, 60S ribosomal protein L35-A, 60S ribosomal protein L36-A, 60S ribosomal protein L37-A, Large ribosomal subunit protein eL38, 60S ribosomal protein L39, Ubiquitin-60S ribosomal protein L40, 60S ribosomal protein L41-A, 60S ribosomal protein L42-A, 60S ribosomal protein L43-A, 40S ribosomal protein S0-A, Small ribosomal subunit protein eS1A, Small ribosomal subunit protein uS5, Small ribosomal subunit protein uS3, 40S ribosomal protein S4-A, Rps5p, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S10-A, 40S ribosomal protein S11-A, Small ribosomal subunit protein eS12, 40S ribosomal protein S13, 40S ribosomal protein S14-A, Small ribosomal subunit protein uS19, 40S ribosomal protein S16-A, 40S ribosomal protein S17-A, 40S ribosomal protein S18-A, 40S ribosomal protein S19-A, Small ribosomal subunit protein uS10, 40S ribosomal protein S21-A, Small ribosomal subunit protein uS8A, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, Small ribosomal subunit protein eS25A, Small ribosomal subunit protein eS26B, 40S ribosomal protein S27-A, Small ribosomal subunit protein eS28A, Small ribosomal subunit protein uS14A, 40S ribosomal protein S30-A, RPS31 isoform 1, Guanine nucleotide-binding protein subunit beta-like protein, Large ribosomal subunit protein uL1A
Pairwise Interactions
Interactions annotated by
FR3D:
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RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9DOV contains:
-
117 hairpin loops from 0 motif groups
-
243 internal loops from 0 motif groups
-
68 junction loops from 0 motif groups
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3D Redundancy
9DOV has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
