9GUL Summary
- Structure title
- Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex
- Authors
- Voisin, T.B., Pellowe, G.A., Balchin, D.
- Release date
- 2025-09-24
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
- Chains
- 4 RNA chains from Homo sapiens
- 42 other chains
- Nucleic acid compounds
- Other compounds
- P-tRNA CCA tail, 28S rRNA, 5S rRNA, 5.8S rRNA
- Stalled NC, 60S ribosomal protein L8, 60S ribosomal protein L3, Large ribosomal subunit protein uL4, 60S ribosomal protein L5, Large ribosomal subunit protein eL6, Large ribosomal subunit protein uL30, 60S ribosomal protein L7a, 60S ribosomal protein L9, Ribosomal protein uL16-like, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, Large ribosomal subunit protein eL40, 60S ribosomal protein L36a, 60S ribosomal protein L37a, 60S ribosomal protein L28
Pairwise Interactions
Interactions annotated by FR3D:- 1,452 base-pairs
- 3,857 base-stacking
- 158 base-phosphate
- 173 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9GUL contains:- 77 hairpin loops from 0 motif groups
- 172 internal loops from 0 motif groups
- 45 junction loops from 0 motif groups
3D Redundancy
9GUL has chains which belong to the following equivalence classes in the current representative set:- NR_all_95119.4 (1)
- NR_all_65061.43 (1)
- NR_all_52752.39 (1)
- NR_4.0_95119.4 (1)
- NR_4.0_65061.43 (1)
- NR_4.0_52752.39 (1)
- NR_3.5_95119.4 (1)
- NR_3.5_65061.43 (1)
- NR_3.5_52752.39 (1)
- NR_3.0_95119.4 (1)
- NR_3.0_65061.43 (1)
- NR_3.0_52752.39 (1)
- NR_20.0_95119.4 (1)
- NR_20.0_65061.43 (1)
- NR_20.0_52752.39 (1)
- NR_2.5_95119.4 (1)
- NR_2.5_65061.43 (1)
- NR_2.5_52752.39 (1)
Similar structures
9J1M 7PWO 4YZV 4YZV 8IP8 8ZTV 6S0K 1VY7 3CD6 4LNT 5GAE 8ZTU 4ZSN 3CMA 4LNT 4L47 1VY7 4L47 5GAG 1KQS 5GAD 7Y38 1VVJ 5GAH 1VVJ 4TUA 4TUD 5LYB 4LFZ 4TUE 3J7Z 4LT8 4LT8 4TUB 4P70 4TUA 6N9E 4TUB 5LYB 4TUD 4TUC 4TUE 4TUC 4LFZ 4P70 4L71 4L71 4V19 4LSK 4LEL 6N9E 3CMA 5GAF 4LSK 4LEL 5O60 7PWG 5NCO 4V19 8OIT 8OIR 5LZE 5LZD 5LZC 5LZB 4ZSN 3J5L 8OIQ 8OIN 1VQO 1M90 1QVG 3CXC 1Q7Y 1QVG 1QVG 1Q86 3CME 1Q86 3CME 6OTR 6OTR 6OXI 8FOM 8FOM 8FON 8FON 6NDK 6OXA 6OXA 6NDK 6OXIStructures from NR_all_95119.4