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9H4N Summary

View in PDB or NAKB
Circular interaction diagram
Structure title
RPL13 (eL13)-mutant 80S ribosome from mouse
Authors
Orgebin, E., Astier, A., Rinaldi, D., Baud'huin, M., Plisson-Chastang, C.
Release date
2025-11-05
Experimental technique
ELECTRON MICROSCOPY
Resolution
2.5 Å
Chains
6 RNA chains from Mus musculus
70 other chains
Nucleic acid compounds
28S ribosomal RNA, 5S ribosomal RNA, Messenger RNA, 5.8S ribosomal RNA, 18S ribosomal RNA, Transfer RNA
Other compounds
Large ribosomal subunit protein uL30, Small ribosomal subunit protein uS13, Large ribosomal subunit protein eL8, Small ribosomal subunit protein eS19, Large ribosomal subunit protein uL6, 40S ribosomal protein S20, Large ribosomal subunit protein uL16-like, Large ribosomal subunit protein uL2, Small ribosomal subunit protein eS21, Large ribosomal subunit protein uL5, Large ribosomal subunit protein uL3, Small ribosomal subunit protein uS12, Large ribosomal subunit protein eL13, Large ribosomal subunit protein uL4, Small ribosomal subunit protein eS26, 60S ribosomal protein L14, Large ribosomal subunit protein uL18, 40S ribosomal protein S28, 60S ribosomal protein L15, 60S ribosomal protein L6, Small ribosomal subunit protein uS14, Large ribosomal subunit protein uL13, Receptor of activated protein C kinase 1, 60S ribosomal protein L17, Small ribosomal subunit protein uS5, Large ribosomal subunit protein eL18, 40S ribosomal protein S6, Large ribosomal subunit protein eL19, Small ribosomal subunit protein uS4, Large ribosomal subunit protein eL20, Large ribosomal subunit protein eL21, Small ribosomal subunit protein uS15, Large ribosomal subunit protein eL22, Small ribosomal subunit protein uS11, 60S ribosomal protein L23, Small ribosomal subunit protein uS8, Large ribosomal subunit protein eL24, Small ribosomal subunit protein eS24, 60S ribosomal protein L23a, Large ribosomal subunit protein uL24, Small ribosomal subunit protein eS27-like, Large ribosomal subunit protein eL27, 40S ribosomal protein S30, 60S ribosomal protein L27a, Large ribosomal subunit protein eL29, Large ribosomal subunit protein eL30, Large ribosomal subunit protein eL31, Large ribosomal subunit protein eL32, 60S ribosomal protein L35a, 60S ribosomal protein L34, Large ribosomal subunit protein uL29, Large ribosomal subunit protein eL36, Large ribosomal subunit protein eL37, 60S ribosomal protein L38, Large ribosomal subunit protein eL39, Large ribosomal subunit protein eL40, Small ribosomal subunit protein eS32, Large ribosomal subunit protein eL42, Large ribosomal subunit protein eL43, Large ribosomal subunit protein eL28, Small ribosomal subunit protein uS2, Small ribosomal subunit protein eS1, Small ribosomal subunit protein uS3, Small ribosomal subunit protein eS4, 40S ribosomal protein S5, 40S ribosomal protein S10, Small ribosomal subunit protein uS17, Small ribosomal subunit protein uS19, Small ribosomal subunit protein uS9, 40S ribosomal protein S17

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 9H4N contains:
  • 122 hairpin loops from 0 motif groups
  • 268 internal loops from 0 motif groups
  • 69 junction loops from 0 motif groups
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3D Redundancy

9H4N has chains which belong to the following equivalence classes in the current representative set:

Similar structures

9KDT 7CPU 9KDW 9KDU 7CPV 9QQP 9QOH 9QWT 7LS2 9QQL 9KDV 6SWA 9QZP 9QSA 7LS1
Structures from NR_all_96091.9
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