9H52 Summary
- Structure title
- Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)
- Authors
- Singh, V., Shiriaev, D., Khawaja, A., Rorbach, J.
- Release date
- 2026-07-08
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
- Chains
- 1 RNA chain from Homo sapiens
- 29 other chains
- Nucleic acid compounds
- Other compounds
- 12S mitochondrial rRNA
- Small ribosomal subunit protein mS34, 28S ribosomal protein S35, mitochondrial, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, Dimethyladenosine transferase 1, mitochondrial, Isoform 2 of Ribosome assembly protein METTL17, mitochondrial, Malonyl-CoA-acyl carrier protein transacylase, mitochondrial, Nitric oxide-associated protein 1, 28S ribosomal protein S2, mitochondrial, 28S ribosomal protein S24, mitochondrial, 28S ribosomal protein S5, mitochondrial, 28S ribosomal protein S6, mitochondrial, 28S ribosomal protein S7, mitochondrial, 28S ribosomal protein S9, mitochondrial, 28S ribosomal protein S12, mitochondrial, 28S ribosomal protein S15, mitochondrial, 28S ribosomal protein S16, mitochondrial, 28S ribosomal protein S17, mitochondrial, 28S ribosomal protein S18b, mitochondrial, 28S ribosomal protein S18c, mitochondrial, MRPS21 isoform 1, 28S ribosomal protein S22, mitochondrial, 28S ribosomal protein S23, mitochondrial, 28S ribosomal protein S25, mitochondrial, 28S ribosomal protein S26, mitochondrial, 28S ribosomal protein S27, mitochondrial, 28S ribosomal protein S28, mitochondrial, 28S ribosomal protein S29, mitochondrial, 28S ribosomal protein S31, mitochondrial, GTPase Era, mitochondrial
Pairwise Interactions
Interactions annotated by FR3D:- 256 base-pairs
- 713 base-stacking
- 53 base-phosphate
- 69 base-ribose
- 26 oxygen stacking
- 38 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9H52 contains:- 16 hairpin loops from 0 motif groups
- 32 internal loops from 0 motif groups
- 7 junction loops from 0 motif groups
3D Redundancy
9H52 has chains which belong to the following equivalence classes in the current representative set:- NR_all_93855.31 (1)
- NR_4.0_93855.31 (1)
- NR_20.0_93855.31 (1)
Similar structures
7QI4 7P2E 7QI5 8RRI 9OJM 9OLF 8ANY 7PNX 7PO1 7PO3 7QI6 6RW5 7PO2 8K2A 7PNY 7PNZ 9VXM 9RU6 9UWH 9PGL 8CSS 9PGF 9G5C 9HFM 9G5D 8XT0 8QRN 9HFO 8CSR 9PSM 9PGI 9PG8 9PS7 8XT2 8CSQ 9PGM 8OIR 9PSI 9ROV 9H51 9PRX 8CST 9G5E 8CSP 9HFN 9PRQ 9G5B 6ZSD 7A5I 9PRD 7L08 6ZSC 9ROR 6VMI 6ZSG 6ZSA 8QRM 6VLZ 8QRL 3J9M 8CSU 9RPF 7OG4 9ROT 9H54 7A5G 9H55 7A5F 9PS0 6ZSB 6ZS9 6NU2 6ZSE 6NU3 8QRK 6ZM6 6RW4 7PO0 6ZM5 8OIS 7A5KStructures from NR_all_93855.31