9PGI Summary
- Structure title
- In situ structure of the human mitoribosome in the A-P-E state with TACO1
- Authors
- Wang, S., Xiong, Y., Zhang, Y.
- Release date
- 2026-02-18
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.0 Å
- Chains
- 7 RNA chains from Homo sapiens
- 87 other chains
- Nucleic acid compounds
- Other compounds
- 16S mitochondrial rRNA, 12S mitochondrial rRNA, A/A-tRNA, P/P-tRNA, E/E-tRNA, mRNA, mitochondrial tRNAVal
- 39S ribosomal protein L32, mitochondrial, 39S ribosomal protein L33, mitochondrial, 39S ribosomal protein L34, mitochondrial, 39S ribosomal protein L35, mitochondrial, 39S ribosomal protein L36, mitochondrial, 39S ribosomal protein L37, mitochondrial, 39S ribosomal protein L38, mitochondrial, 39S ribosomal protein L39, mitochondrial, 39S ribosomal protein L40, mitochondrial, 39S ribosomal protein L41, mitochondrial, Small ribosomal subunit protein mS34, 28S ribosomal protein S35, mitochondrial, Small ribosomal subunit protein mS37, Aurora kinase A-interacting protein, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, 28S ribosomal protein S2, mitochondrial, 28S ribosomal protein S24, mitochondrial, 28S ribosomal protein S5, mitochondrial, 28S ribosomal protein S6, mitochondrial, 28S ribosomal protein S7, mitochondrial, 28S ribosomal protein S9, mitochondrial, 28S ribosomal protein S10, mitochondrial, 28S ribosomal protein S11, mitochondrial, 28S ribosomal protein S12, mitochondrial, 28S ribosomal protein S14, mitochondrial, 28S ribosomal protein S15, mitochondrial, 28S ribosomal protein S16, mitochondrial, 28S ribosomal protein S17, mitochondrial, 28S ribosomal protein S18b, mitochondrial, 28S ribosomal protein S18c, mitochondrial, Small ribosomal subunit protein bS21m, 28S ribosomal protein S22, mitochondrial, 28S ribosomal protein S23, mitochondrial, 28S ribosomal protein S25, mitochondrial, 28S ribosomal protein S26, mitochondrial, 28S ribosomal protein S27, mitochondrial, 28S ribosomal protein S28, mitochondrial, 28S ribosomal protein S29, mitochondrial, 28S ribosomal protein S31, mitochondrial, 28S ribosomal protein S33, mitochondrial, Translational activator of cytochrome c oxidase 1, 39S ribosomal protein L2, mitochondrial, 39S ribosomal protein L3, mitochondrial, 39S ribosomal protein L4, mitochondrial, 39S ribosomal protein L12, mitochondrial, 39S ribosomal protein L9, mitochondrial, 39S ribosomal protein L10, mitochondrial, 39S ribosomal protein L11, mitochondrial, Large ribosomal subunit protein uL13m, 39S ribosomal protein L14, mitochondrial, 39S ribosomal protein L15, mitochondrial, 39S ribosomal protein L16, mitochondrial, 39S ribosomal protein L17, mitochondrial, Mitochondrial inner membrane protein OXA1L, 39S ribosomal protein L18, mitochondrial, 39S ribosomal protein L19, mitochondrial, 39S ribosomal protein L20, mitochondrial, 39S ribosomal protein L21, mitochondrial, 39S ribosomal protein L22, mitochondrial, 39S ribosomal protein L23, mitochondrial, 39S ribosomal protein L24, mitochondrial, 39S ribosomal protein L27, mitochondrial, 39S ribosomal protein L28, mitochondrial, 39S ribosomal protein L47, mitochondrial, 39S ribosomal protein L30, mitochondrial, 39S ribosomal protein L42, mitochondrial, 39S ribosomal protein L43, mitochondrial, 39S ribosomal protein L44, mitochondrial, 39S ribosomal protein L45, mitochondrial, 39S ribosomal protein L46, mitochondrial, 39S ribosomal protein L48, mitochondrial, 39S ribosomal protein L49, mitochondrial, 39S ribosomal protein L50, mitochondrial, 39S ribosomal protein L51, mitochondrial, 39S ribosomal protein L52, mitochondrial, Large ribosomal subunit protein mL53, 39S ribosomal protein L54, mitochondrial, 39S ribosomal protein L55, mitochondrial, Nascent polypeptide, Ribosomal protein 63, mitochondrial, Peptidyl-tRNA hydrolase ICT1, mitochondrial, Growth arrest and DNA damage-inducible proteins-interacting protein 1, 39S ribosomal protein S18a, mitochondrial, 39S ribosomal protein S30, mitochondrial, 39S ribosomal protein L12, mitochondrial, 39S ribosomal protein L12, mitochondrial, Large ribosomal subunit protein uL1m
Pairwise Interactions
Interactions annotated by FR3D:- 990 base-pairs
- 2,705 base-stacking
- 137 base-phosphate
- 147 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9PGI contains:- 68 hairpin loops from 0 motif groups
- 113 internal loops from 0 motif groups
- 33 junction loops from 0 motif groups
3D Redundancy
9PGI has chains which belong to the following equivalence classes in the current representative set:- NR_all_12763.34 (1)
- NR_all_73428.28 (1)
- NR_all_93855.22 (1)
- NR_all_41135.1 (1)
- NR_all_39095.1 (1)
- NR_all_18172.1 (1)
- NR_4.0_12763.34 (1)
- NR_4.0_73428.28 (1)
- NR_4.0_93855.22 (1)
- NR_4.0_41135.1 (1)
- NR_4.0_39095.1 (1)
- NR_4.0_18172.1 (1)
- NR_3.5_12763.34 (1)
- NR_3.5_73428.28 (1)
- NR_3.5_93855.22 (1)
- NR_3.5_41135.1 (1)
- NR_3.5_39095.1 (1)
- NR_3.5_18172.1 (1)
- NR_20.0_12763.34 (1)
- NR_20.0_73428.28 (1)
- NR_20.0_93855.22 (1)
- NR_20.0_41135.1 (1)
- NR_20.0_39095.1 (1)
- NR_20.0_18172.1 (1)
Similar structures
7QI4 8RRI 7QI5 9OLF 7OF0 8ANY 8K2A 7OF6 7OF7 7OF4 7OF2 7QI6 7OF3 9CN3 9PR4 9PGL 7OF5 9PRA 9PGF 9PSM 8OIT 9UWH 8XT0 8XT1 8XT3 9PG8 8XT2 8OIR 9PS7 8QSJ 7ODS 7ODT 9PGM 7PO4 7L20 9PSI 7QH7 6ZSC 8K2B 7OIE 9PRX 7OIA 6ZSD 9PRQ 9PRD 7A5I 7OID 7L08 7OI8 7OG4 8PK0 7OIB 6ZSG 6ZSA 7QH6 6ZS9 6VMI 6VLZ 3J7Y 7OI9 9PS0 3J9M 8QU1 6I9R 7OI7 6ZSB 5OOL 6NU2 7A5G 7A5F 5OOM 6ZSE 6NU3 7OI6 8QU5 6ZM6 6ZM5 7ODR 7O9M 7O9K 7OIC 7A5J 7A5H 7A5K 7PD3Structures from NR_all_12763.34