- Structure title
- NediV IRES (P site) in complex with Rabbit 80S ribosome
- Authors
- De, S., Altomare, C.G., Abaeva, I.S., Dadhwal, P., Garg, P., Acosta-Reyes, F., Brown, Z.P., Pestova, T.V., Hellen, C.U.T., Frank, J.
- Release date
- 2026-06-17
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.0 Å
- Chains
-
5 RNA chains from
Nedicistrovirus TFN-2012, Oryctolagus cuniculus
-
73 other chains
- Nucleic acid compounds
NediV IRES, 28S ribosomal RNA, 5S rRNA, 5.8S rRNA, 18S rRNA
- Other compounds
60S ribosomal protein L8, 40S_SA_C domain-containing protein, 60S ribosomal protein L3, 40S ribosomal protein S3a, 60S ribosomal protein L4, 40S ribosomal protein S2, 60S ribosomal protein L5, Small ribosomal subunit protein uS3, Large ribosomal subunit protein eL6, 40S ribosomal protein S4, 60S ribosomal protein L7, Small ribosomal subunit protein uS7, Large ribosomal subunit protein eL8, Small ribosomal subunit protein eS6, 60S ribosomal protein L9, Small ribosomal subunit protein eS7, Ribosomal protein L10, 40S ribosomal protein S8, 60S ribosomal protein L11, Small ribosomal subunit protein uS4, eL1, Small ribosomal subunit protein eS10, Large ribosomal subunit protein eL13, Small ribosomal subunit protein uS17, 60S ribosomal protein L14, 60S ribosomal protein L15, 40S ribosomal protein S13, Large ribosomal subunit protein uL13, Small ribosomal subunit protein uS11, 60S ribosomal protein L17, Small ribosomal subunit protein uS19, Large ribosomal subunit protein eL18, Small ribosomal subunit protein uS9, 60S ribosomal protein L19, 40S ribosomal protein S17, eL20, 40S ribosomal protein S18, 60S ribosomal protein L21, Small ribosomal subunit protein eS19, eL22, uS10, Large ribosomal subunit protein uL14, eS21, Large ribosomal subunit protein eL24, 40S ribosomal protein S15a, Large ribosomal subunit protein uL23, 40S ribosomal protein S23, 60S ribosomal protein L26, 40S ribosomal protein S24, 60S ribosomal protein L27, 40S ribosomal protein S25, 60S ribosomal protein L27a, eS26, Large ribosomal subunit protein eL29, 40S ribosomal protein S27, 60S ribosomal protein L30, 40S ribosomal protein S28, 60S ribosomal protein L31, 40S ribosomal protein S29, Large ribosomal subunit protein eL32, Small ribosomal subunit protein eS30, Large ribosomal subunit protein eL33, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, Large ribosomal subunit protein eL38, 60S ribosomal protein L39, Large ribosomal subunit protein eL40, eL41, eL42, 60S ribosomal protein L37a, 60S ribosomal protein L28
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9Q1S contains:
-
116 hairpin loops from 0 motif groups
-
262 internal loops from 0 motif groups
-
66 junction loops from 0 motif groups
More
3D Redundancy
9Q1S has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
