9T4R Summary
- Structure title
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Authors
- Bahena Ceron, R., Klaholz, B., Marzi, S.
- Release date
- 2026-02-25
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
- Chains
- 5 RNA chains from Staphylococcus aureus, Escherichia coli
- 47 other chains
- Nucleic acid compounds
- Other compounds
- 16S rRNA, aur mRNA, Methionine tRNA, 23S rRNA, 5S rRNA
- Large ribosomal subunit protein bL33B, Large ribosomal subunit protein bL34, Large ribosomal subunit protein bL35, Large ribosomal subunit protein bL36, Large ribosomal subunit protein bL31B, Small ribosomal subunit protein uS2, Small ribosomal subunit protein uS3, Small ribosomal subunit protein uS4, Small ribosomal subunit protein uS5, Small ribosomal subunit protein bS6, Small ribosomal subunit protein uS7, Small ribosomal subunit protein uS8, Small ribosomal subunit protein uS9, Large ribosomal subunit protein uL13, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS12, Small ribosomal subunit protein uS13, Small ribosomal subunit protein uS14B, Small ribosomal subunit protein uS15, Small ribosomal subunit protein bS16, Small ribosomal subunit protein uS17, Small ribosomal subunit protein bS18, Small ribosomal subunit protein uS19, Small ribosomal subunit protein bS20, Large ribosomal subunit protein uL14, Large ribosomal subunit protein uL2, Large ribosomal subunit protein uL3, Large ribosomal subunit protein uL4, Large ribosomal subunit protein uL5, Large ribosomal subunit protein uL6, Small ribosomal subunit protein uS10, Large ribosomal subunit protein uL15, Large ribosomal subunit protein uL16, Large ribosomal subunit protein bL17, Large ribosomal subunit protein uL18, Large ribosomal subunit protein bL19, Large ribosomal subunit protein bL20, Large ribosomal subunit protein bL21, Large ribosomal subunit protein uL22, Large ribosomal subunit protein uL23, Large ribosomal subunit protein uL24, Large ribosomal subunit protein bL25, Large ribosomal subunit protein bL27, Large ribosomal subunit protein bL28, Large ribosomal subunit protein uL29, Large ribosomal subunit protein uL30, Large ribosomal subunit protein bL32
Pairwise Interactions
Interactions annotated by FR3D:- 2,025 base-pairs
- 4,915 base-stacking
- 569 base-phosphate
- 657 base-ribose
- 230 oxygen stacking
- 239 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9T4R contains:- 106 hairpin loops from 0 motif groups
- 185 internal loops from 0 motif groups
- 64 junction loops from 0 motif groups
3D Redundancy
9T4R has chains which belong to the following equivalence classes in the current representative set:- NR_all_35542.160 (1)
- NR_all_90633.28 (1)
- NR_all_83891.27 (1) rep
- NR_all_74023.18 (1)
- NR_all_27211.1 (1) rep
- NR_4.0_35542.160 (1)
- NR_4.0_90633.28 (1)
- NR_4.0_83891.27 (1) rep
- NR_4.0_74023.18 (1)
- NR_4.0_27211.1 (1) rep
- NR_3.5_35542.160 (1)
- NR_3.5_90633.28 (1)
- NR_3.5_83891.27 (1) rep
- NR_3.5_74023.18 (1)
- NR_3.5_27211.1 (1) rep
- NR_3.0_35542.160 (1)
- NR_3.0_90633.28 (1)
- NR_3.0_83891.27 (1) rep
- NR_3.0_74023.18 (1)
- NR_3.0_27211.1 (1) rep
- NR_20.0_35542.160 (1)
- NR_20.0_90633.28 (1)
- NR_20.0_83891.27 (1) rep
- NR_20.0_74023.18 (1)
- NR_20.0_27211.1 (1) rep
- NR_2.5_35542.160 (1)
- NR_2.5_90633.28 (1)
- NR_2.5_83891.27 (1) rep
- NR_2.5_74023.18 (1)
- NR_2.5_27211.1 (1) rep