9TZ5 Summary
- Structure title
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Authors
- Stuart, W.S., Isupov, M.N., Harmer, N.J.
- Release date
- 2026-04-22
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
- Chains
- 2 RNA chains from Coxiella burnetii
- 29 other chains
- Nucleic acid compounds
- Other compounds
- 23S ribosomal RNA, 5S ribosomal RNA
- Large ribosomal subunit protein bL33, Large ribosomal subunit protein uL24, Large ribosomal subunit protein uL18, Large ribosomal subunit protein bL36, Large ribosomal subunit protein uL23, Large ribosomal subunit protein bL27, Large ribosomal subunit protein bL28, Coxiellacae Large Subunit Peptide (CLaSP), Large ribosomal subunit protein bL19, Large ribosomal subunit protein uL3, Large ribosomal subunit protein bL20, Large ribosomal subunit protein uL5, Large ribosomal subunit protein uL6, Large ribosomal subunit protein bL21, Large ribosomal subunit protein uL13, Large ribosomal subunit protein uL22, Large ribosomal subunit protein uL15, Large ribosomal subunit protein bL17, Large ribosomal subunit protein uL2, Large ribosomal subunit protein bL9, Large ribosomal subunit protein uL29, Large ribosomal subunit protein uL16, Large ribosomal subunit protein uL30, Large ribosomal subunit protein bL25, Large ribosomal subunit protein bL32, Large ribosomal subunit protein uL4, Large ribosomal subunit protein uL14, Large ribosomal subunit protein bL34, Large ribosomal subunit protein bL35
Pairwise Interactions
Interactions annotated by FR3D:- 1,309 base-pairs
- 3,148 base-stacking
- 360 base-phosphate
- 431 base-ribose
- 144 oxygen stacking
- 294 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9TZ5 contains:- 69 hairpin loops from 0 motif groups
- 117 internal loops from 0 motif groups
- 41 junction loops from 0 motif groups
3D Redundancy
9TZ5 has chains which belong to the following equivalence classes in the current representative set:- NR_all_82100.1 (1) rep
- NR_all_82169.1 (1)
- NR_4.0_82100.1 (1) rep
- NR_4.0_82169.1 (1)
- NR_3.5_82100.1 (1) rep
- NR_3.5_82169.1 (1)
- NR_3.0_82100.1 (1) rep
- NR_3.0_82169.1 (1)
- NR_20.0_82100.1 (1) rep
- NR_20.0_82169.1 (1)
- NR_2.5_82100.1 (1) rep
- NR_2.5_82169.1 (1)