9U0O Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9U0O_001 | 1/a/12:23 | No text annotation | ||
| HL_9U0O_002 | 1/a/31:39 | No text annotation | homologous HL_8WND_004 HL_33983.1 | |
| HL_9U0O_003 | 1/a/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5J8B_110 HL_33597.8 | |
| HL_9U0O_004 | 1/b/12:23 | No text annotation | homologous HL_1F7U_001 HL_55043.2 | |
| HL_9U0O_005 | 1/b/31:39 | No text annotation | homologous HL_8WND_004 HL_33983.1 | |
| HL_9U0O_006 | 1/b/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5J8B_110 HL_33597.8 | |
| HL_9U0O_007 | 1/c/12:23 | No text annotation | ||
| HL_9U0O_008 | 1/c/31:39 | No text annotation | homologous HL_8WND_004 HL_33983.1 | |
| HL_9U0O_009 | 1/c/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5J8B_110 HL_33597.8 | |
| HL_9U0O_010 | 1/d/12:23 | No text annotation | homologous HL_1F7U_001 HL_55043.2 | |
| HL_9U0O_011 | 1/d/31:39 | No text annotation | homologous HL_8WND_004 HL_33983.1 | |
| HL_9U0O_012 | 1/d/53:61 | T-loop with 2 stacked bulged bases | homologous HL_5J8B_110 HL_33597.8 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_9U0O_001 | 1/a/7:10, 1/a/25:27, 1/a/43:49, 1/a/65:66 | tRNA junction | homologous J4_8VU0_001 J4_95067.3 | |
| J4_9U0O_002 | 1/b/7:10, 1/b/25:27, 1/b/43:49, 1/b/65:66 | tRNA junction | homologous J4_5AXM_001 J4_95067.3 | |
| J4_9U0O_003 | 1/c/7:10, 1/c/25:27, 1/c/43:49, 1/c/65:66 | tRNA junction | homologous J4_5AXM_001 J4_95067.3 | |
| J4_9U0O_004 | 1/d/7:10, 1/d/25:27, 1/d/43:49, 1/d/65:66 | tRNA junction | homologous J4_8VU0_001 J4_95067.3 |
Problematic loops
No problematic loops
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