- Structure title
- Cryo-EM structure of SecM-arrested 70S ribosome with YheS
- Authors
- Iso, K., Ando, Y., Taguchi, H., Nureki, O., Chadani, Y., Itoh, Y.
- Release date
- 2026-06-17
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
- Chains
-
6 RNA chains from
Escherichia coli
-
52 other chains
- Nucleic acid compounds
16S rRNA, SecM mRNA, A-site tRNA (prolyl-tRNAPro), P-site tRNA (tRNAGly), 23S rRNA, 5S rRNA
- Other compounds
Large ribosomal subunit protein bL33, 50S ribosomal protein L34, Large ribosomal subunit protein bL35, 50S ribosomal protein L36, 50S ribosomal protein L31, Secretion monitor, Large ribosomal subunit protein uL1, 30S ribosomal protein S2, Small ribosomal subunit protein uS3, Small ribosomal subunit protein uS4, Small ribosomal subunit protein uS5, 30S ribosomal protein S6, fully modified isoform, Small ribosomal subunit protein uS7, Small ribosomal subunit protein uS8, Small ribosomal subunit protein uS9, Small ribosomal subunit protein uS10, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS12, Small ribosomal subunit protein uS13, Small ribosomal subunit protein uS14, Small ribosomal subunit protein uS15, Small ribosomal subunit protein bS16, Small ribosomal subunit protein uS17, Small ribosomal subunit protein bS18, Small ribosomal subunit protein uS19, Small ribosomal subunit protein bS20, 30S ribosomal protein S21, Probable ATP-binding protein YheS, Large ribosomal subunit protein uL2, 50S ribosomal protein L3, 50S ribosomal protein L4, Large ribosomal subunit protein uL5, Large ribosomal subunit protein uL6, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, Large ribosomal subunit protein bL17, Large ribosomal subunit protein uL18, Large ribosomal subunit protein bL19, Large ribosomal subunit protein bL20, 50S ribosomal protein L21, 50S ribosomal protein L22, Large ribosomal subunit protein uL23, 50S ribosomal protein L24, 50S ribosomal protein L25, Large ribosomal subunit protein bL27, Large ribosomal subunit protein bL28, Large ribosomal subunit protein uL29, Large ribosomal subunit protein uL30, Large ribosomal subunit protein bL32
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9VVI contains:
-
106 hairpin loops from 0 motif groups
-
182 internal loops from 0 motif groups
-
65 junction loops from 0 motif groups
More
3D Redundancy
9VVI has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
.
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