#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13PEY|1|B (rep)RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')S. cerevisiae Dbp5 bound to RNA and ADP BeF3X-ray diffraction1.42011-03-23
23PEW|1|BRNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3X-ray diffraction1.52011-03-23
34ALP|1|EHEXA URIDINEsynthetic constructThe Lin28b Cold shock domain in complex with hexauridineX-ray diffraction1.482012-09-05
45SZE|1|CRNA (5'-R(P*UP*UP*U)-3')unidentifiedCrystal structure of Aquifex aeolicus Hfq-RNA complex at 1.5AX-ray diffraction1.52017-04-12
57SOW|1|BRNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')synthetic constructLaM domain of human LARP1 in complex with UUUUUUX-ray diffraction1.32022-11-09

Release history

Release3.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.271
Date2022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_1.5_74924.18NR_1.5_74924.173.256(4) 5SZE|1|C, 4ALP|1|E, 3PEY|1|B, 3PEW|1|B(1) 7SOW|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_1.5_74924.18NR_1.5_74924.193.272(5) 3PEW|1|B, 3PEY|1|B, 4ALP|1|E, 5SZE|1|C, 7SOW|1|B(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13PEW|1|BS. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3X-RAY DIFFRACTION1.56
23PEY|1|BS. cerevisiae Dbp5 bound to RNA and ADP BeF3X-RAY DIFFRACTION1.46
37SOW|1|BLaM domain of human LARP1 in complex with UUUUUUX-RAY DIFFRACTION1.34
44ALP|1|EThe Lin28b Cold shock domain in complex with hexauridineX-RAY DIFFRACTION1.486
55SZE|1|CCrystal structure of Aquifex aeolicus Hfq-RNA complex at 1.5AX-RAY DIFFRACTION1.53
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