Equivalence class NR_20.0_56633.5 Obsolete
# | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 7OIZ|1|V (rep) | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | Electron microscopy | 2.9 | 2021-09-15 |
2 | 6I0Y|1|V | Transfer RNA | Proline tRNA | Escherichia coli | Bacteria | RF00005 | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | Electron microscopy | 3.2 | 2018-12-05 |
3 | 7OJ0|1|V | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | Electron microscopy | 3.5 | 2021-09-15 |
4 | 3JBU|1|v | Transfer RNA | glycine-tRNA | Escherichia coli | Bacteria | RF00005 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
5 | 4UY8|1|V | Transfer RNA | RNA | Escherichia coli | Bacteria | RF00005 | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | Electron microscopy | 3.8 | 2014-10-29 |
6 | 5NP6|1|B | Transfer RNA | P-site tRNA-Gly, mRNA | Escherichia coli | Bacteria | RF00005 | 70S structure prior to bypassing | Electron microscopy | 3.6 | 2017-06-14 |
7 | 4V5H|1|AV | Transfer RNA | P-SITE TRNA, MRNA | Escherichia coli | Bacteria | RF00005 | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | Electron microscopy | 5.8 | 2014-07-09 |
8 | 4V6M|1|AV | Transfer RNA | FtsQ nascent chain, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of the ribosome-SecYE complex in the membrane environment | Electron microscopy | 7.1 | 2014-07-09 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 4V5H|1|AV | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | ELECTRON MICROSCOPY | 5.8 | 76 |
2 | 4UY8|1|V | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | ELECTRON MICROSCOPY | 3.8 | 76 |
3 | 6I0Y|1|V | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | ELECTRON MICROSCOPY | 3.2 | 77 |
4 | 4V6M|1|AV | Structure of the ribosome-SecYE complex in the membrane environment | ELECTRON MICROSCOPY | 7.1 | 77 |
5 | 7OIZ|1|V | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | ELECTRON MICROSCOPY | 2.9 | 74 |
6 | 7OJ0|1|V | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | ELECTRON MICROSCOPY | 3.5 | 74 |
7 | 5NP6|1|B | 70S structure prior to bypassing | ELECTRON MICROSCOPY | 3.6 | 76 |
8 | 3JBU|1|v | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.64 | 76 |