Equivalence class NR_3.5_90840.5 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8G9Z|1|E (rep) | RNA (90-MER) | Homo sapiens | Eukarya | High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex | X-ray diffraction | 2.07 | 2023-04-05 | ||
| 2 | 7MDL|1|E | Selenocysteine transfer RNA | RNA (90-MER) | synthetic construct | Synthetic | RF01852 | High-resolution crystal structure of human SepSecS-tRNASec complex | X-ray diffraction | 2.32 | 2022-11-09 |
| 3 | 4ZDO|1|E | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | The crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec) | X-ray diffraction | 2.65 | 2016-04-20 |
| 4 | 3A3A|1|A | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | Crystal structure of human selenocystine tRNA | X-ray diffraction | 3.1 | 2009-08-11 |
| 5 | 4ZDP|1|E | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | The crystal structure of Y334C mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec) | X-ray diffraction | 2.7 | 2016-04-20 |
| 6 | 4RQF|1|C | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec | X-ray diffraction | 3.5 | 2015-11-04 |
| 7 | 3HL2|1|E | Selenocysteine transfer RNA | tRNASec | Homo sapiens | Eukarya | RF01852 | The crystal structure of the human SepSecS-tRNASec complex | X-ray diffraction | 2.81 | 2009-10-06 |
| 8 | 7ZJW|1|F | Selenocysteine transfer RNA | human Ser-tRNA-Sec | Homo sapiens | Eukarya | RF01852 | Rabbit 80S ribosome as it decodes the Sec-UGA codon | Electron microscopy | 2.8 | 2022-10-19 |
Release history
| Release | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8G9Z|1|E | High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex | X-RAY DIFFRACTION | 2.07 | 174 |
| 2 | 7MDL|1|E | High-resolution crystal structure of human SepSecS-tRNASec complex | X-RAY DIFFRACTION | 2.32 | 168 |
| 3 | 4ZDO|1|E | The crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec) | X-RAY DIFFRACTION | 2.65 | 150 |
| 4 | 4ZDP|1|E | The crystal structure of Y334C mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec) | X-RAY DIFFRACTION | 2.7 | 148 |
| 5 | 3HL2|1|E | The crystal structure of the human SepSecS-tRNASec complex | X-RAY DIFFRACTION | 2.81 | 164 |
| 6 | 3A3A|1|A | Crystal structure of human selenocystine tRNA | X-RAY DIFFRACTION | 3.1 | 86 |
| 7 | 4RQF|1|C | human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec | X-RAY DIFFRACTION | 3.5 | 63 |
| 8 | 7ZJW|1|F | Rabbit 80S ribosome as it decodes the Sec-UGA codon | ELECTRON MICROSCOPY | 2.8 | 90 |