#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V9B|1|AC (rep)TRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
24V95|1|AVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
34V8X|1|CVtransfer RNA, BACTERIAL TOXIN YOEBThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
44V9A|1|ACTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
54V9N|1|AWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
64V9N|1|CWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
73J9Z|1|S6P-tRNAThermus thermophilusActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
84V8X|1|AVtransfer RNA, 5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3'Thermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
94V7J|1|AvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
104V7J|1|BvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
114V9B|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
124V95|1|CVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
134V7K|1|BvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
144WT8|1|C4P site trNA, mRNAThermus thermophilusCrystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.42015-01-21
154V9A|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
164L47|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
173JA1|1|S2P/E-tRNA, mRNAThermus thermophilusActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
184L47|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
194V7K|1|AvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
204V8U|1|AWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
214V8U|1|CWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
224V4J|1|zP-site tRNAfMET, MRNAThermus thermophilusInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.832014-07-09
234V9B|1|ADTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
244V7K|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
254V8X|1|CWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
264V5A|1|AWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
274V7K|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
284V8X|1|AWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
294V7J|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
304V7J|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
314V5A|1|CWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
324V9B|1|CDTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09

Release history

Release2.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.59
Date2015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-22

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J9Z|1|S6Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.677
24V9B|1|ACCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.177
34V9A|1|ACCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.377
44WT8|1|C4Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.477
54V9A|1|CCCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.377
64V9B|1|CCCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.177
74V95|1|CVCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.277
84V7J|1|AvStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.376
94V7K|1|AvStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.676
104V7K|1|BvStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.676
114V7J|1|BvStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.376
124V9N|1|CWCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.477
134V9N|1|AWCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.477
144V95|1|AVCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.277
154L47|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.2277
164L47|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.2277
174V4J|1|zInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.8377
184V8X|1|CVStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.3577
194V8X|1|AVStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.3576
204V8U|1|AWCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
214V8U|1|CWCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
224V5A|1|AWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.576
234V5A|1|CWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.576
244V8X|1|CWStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.3577
254V7J|1|AwStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.377
264V8X|1|AWStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.3577
274V7K|1|AwStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.677
284V7J|1|BwStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.377
294V7K|1|BwStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.677
304V9B|1|CDCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.177
314V9B|1|ADCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.177
323JA1|1|S2Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.677