#IFECompound(s)RNA source organismTitleMethodResolutionDate
17TZS|1|X (rep)RNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.212022-05-25
22GDI|1|XTPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
32GDI|1|YTPP riboswitchCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.052006-07-04
47TZS|1|YRNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.212022-05-25
57TDA|1|AthiM TPP riboswitch RNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.252022-02-16
67TDB|1|AthiM riboswitch RNA (83-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, manganese ionsX-RAY DIFFRACTION2.562022-02-16
74NYA|1|AthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amineX-RAY DIFFRACTION2.652014-06-04
82HOJ|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.52006-09-19
97TDC|1|AthiM riboswitch RNA (83-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.462022-02-16
102HOM|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphateX-RAY DIFFRACTION2.892006-09-19
112HOL|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ionsX-RAY DIFFRACTION2.92006-09-19
127TZR|1|XRNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)X-RAY DIFFRACTION2.72022-05-25
134NYC|1|AthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thieno[2,3-b]pyrazin-7-amineX-RAY DIFFRACTION3.152014-06-04
144NYD|1|AthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with hypoxanthineX-RAY DIFFRACTION2.92014-06-04
154NYA|1|BthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amineX-RAY DIFFRACTION2.652014-06-04
167TZR|1|YRNA (80-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)X-RAY DIFFRACTION2.72022-05-25
174NYB|1|AthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamineX-RAY DIFFRACTION3.12014-06-04
182HOO|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to benfotiamineX-RAY DIFFRACTION32006-09-19
197TZT|1|ARNA (79-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch in complex with N1,N1-dimethyl-N2-(quinoxalin-6-ylmethyl)ethane-1,2-diamine (linked compound 37)X-RAY DIFFRACTION2.962022-05-25
207TZU|1|ARNA (79-MER)Escherichia coliCrystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)X-RAY DIFFRACTION2.872022-05-25
212HOK|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ionsX-RAY DIFFRACTION3.22006-09-19
227TD7|1|AthiM riboswitch RNA (78-MER)Escherichia coliCrystal structure of an E. coli thiM riboswitch bound to thiamine, manganese ionsX-RAY DIFFRACTION2.952022-02-16
234NYG|1|AthiM TPP riboswitchEscherichia coliCrystal structure of the E. coli thiM riboswitch in complex with thiamineX-RAY DIFFRACTION3.052014-06-04
242HOP|1|Athi-box riboswitchCrystal structure of an E. coli thi-box riboswitch bound to pyrithiamineX-RAY DIFFRACTION3.32006-09-19

Release history

Release3.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.248
Date2022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-14

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14NYG|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamineX-RAY DIFFRACTION3.0578
22HOP|1|ACrystal structure of an E. coli thi-box riboswitch bound to pyrithiamineX-RAY DIFFRACTION3.376
32HOO|1|ACrystal structure of an E. coli thi-box riboswitch bound to benfotiamineX-RAY DIFFRACTION383
47TZT|1|ACrystal structure of the E. coli thiM riboswitch in complex with N1,N1-dimethyl-N2-(quinoxalin-6-ylmethyl)ethane-1,2-diamine (linked compound 37)X-RAY DIFFRACTION2.9679
57TZU|1|ACrystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)X-RAY DIFFRACTION2.8779
67TD7|1|ACrystal structure of an E. coli thiM riboswitch bound to thiamine, manganese ionsX-RAY DIFFRACTION2.9578
74NYC|1|ACrystal structure of the E. coli thiM riboswitch in complex with thieno[2,3-b]pyrazin-7-amineX-RAY DIFFRACTION3.1579
84NYB|1|ACrystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamineX-RAY DIFFRACTION3.179
94NYD|1|ACrystal structure of the E. coli thiM riboswitch in complex with hypoxanthineX-RAY DIFFRACTION2.979
107TDA|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.2579
117TDB|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, manganese ionsX-RAY DIFFRACTION2.5679
127TDC|1|ACrystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ionsX-RAY DIFFRACTION2.4679
132HOJ|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.578
142HOL|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ionsX-RAY DIFFRACTION2.979
152HOK|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ionsX-RAY DIFFRACTION3.278
162HOM|1|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphateX-RAY DIFFRACTION2.8980
172GDI|1|XCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578
187TZR|1|XCrystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)X-RAY DIFFRACTION2.778
197TZS|1|XCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.2178
204NYA|1|ACrystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amineX-RAY DIFFRACTION2.6578
217TZS|1|YCrystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)X-RAY DIFFRACTION2.2178
227TZR|1|YCrystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)X-RAY DIFFRACTION2.778
234NYA|1|BCrystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amineX-RAY DIFFRACTION2.6578
242GDI|1|YCrystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578