Equivalence class NR_4.0_73165.3 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 4PRF|1|B (rep) | Hepatitis Delta virus ribozyme | A Second Look at the HDV Ribozyme Structure and Dynamics. | X-RAY DIFFRACTION | 2.39 | 2014-10-29 | |
| 2 | 2OJ3|1|B | HDV RIBOZYME | Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+) | X-RAY DIFFRACTION | 2.9 | 2007-03-27 | |
| 3 | 1SJF|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Cobalt Hexammine solution | X-RAY DIFFRACTION | 2.75 | 2004-05-18 | |
| 4 | 1VC0|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution | X-RAY DIFFRACTION | 2.5 | 2004-05-18 | |
| 5 | 1VC6|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutions | X-RAY DIFFRACTION | 2.8 | 2004-05-18 | |
| 6 | 1VBZ|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution | X-RAY DIFFRACTION | 2.8 | 2004-05-18 | |
| 7 | 1SJ4|1|R | precursor form of the Hepatitis Delta virus ribozyme | Hepatitis delta virus | Crystal structure of a C75U mutant Hepatitis Delta Virus ribozyme precursor, in Cu2+ solution | X-RAY DIFFRACTION | 2.7 | 2004-05-18 |
| 8 | 1SJ3|1|R | precursor form of the Hepatitis Delta virus ribozyme | Hepatitis delta virus | Hepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ Bound | X-RAY DIFFRACTION | 2.2 | 2004-05-18 |
| 9 | 2OIH|1|B | HDV ribozyme | Hepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+ | X-RAY DIFFRACTION | 2.4 | 2007-03-27 | |
| 10 | 1VC5|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution | X-RAY DIFFRACTION | 3.4 | 2004-05-18 | |
| 11 | 1VBY|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound | X-RAY DIFFRACTION | 2.9 | 2004-05-18 | |
| 12 | 1VBX|1|B | Hepatitis Delta virus ribozyme | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution | X-RAY DIFFRACTION | 2.7 | 2004-05-18 | |
| 13 | 1DRZ|1|B | RNA (HEPATITIS DELTA VIRUS GENOMIC RIBOZYME) | Hepatitis delta virus | U1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMIC RIBOZYME COMPLEX | X-RAY DIFFRACTION | 2.3 | 1999-02-16 |
Release history
| Release | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 | 3.156 | 3.157 | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 | 3.179 | 3.180 | 3.181 | 3.182 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 | 2020-12-09 | 2020-12-16 | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 | 2021-05-19 | 2021-05-26 | 2021-06-02 | 2021-06-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4PRF|1|B | A Second Look at the HDV Ribozyme Structure and Dynamics. | X-RAY DIFFRACTION | 2.39 | 75 |
| 2 | 1VC6|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutions | X-RAY DIFFRACTION | 2.8 | 72 |
| 3 | 1SJF|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Cobalt Hexammine solution | X-RAY DIFFRACTION | 2.75 | 74 |
| 4 | 1VBZ|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution | X-RAY DIFFRACTION | 2.8 | 73 |
| 5 | 1VC0|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution | X-RAY DIFFRACTION | 2.5 | 73 |
| 6 | 1VBY|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound | X-RAY DIFFRACTION | 2.9 | 73 |
| 7 | 1SJ3|1|R | Hepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ Bound | X-RAY DIFFRACTION | 2.2 | 73 |
| 8 | 1SJ4|1|R | Crystal structure of a C75U mutant Hepatitis Delta Virus ribozyme precursor, in Cu2+ solution | X-RAY DIFFRACTION | 2.7 | 73 |
| 9 | 1VBX|1|B | Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution | X-RAY DIFFRACTION | 2.7 | 73 |
| 10 | 2OIH|1|B | Hepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+ | X-RAY DIFFRACTION | 2.4 | 73 |
| 11 | 2OJ3|1|B | Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+) | X-RAY DIFFRACTION | 2.9 | 73 |
| 12 | 1VC5|1|B | Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution | X-RAY DIFFRACTION | 3.4 | 70 |
| 13 | 1DRZ|1|B | U1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMIC RIBOZYME COMPLEX | X-RAY DIFFRACTION | 2.3 | 72 |