#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17SYW|1|i (rep)Transfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)Electron microscopy3.72022-07-13
27SYX|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)Electron microscopy3.72022-07-13
36HCJ|1|33Transfer RNAP/E tRNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsElectron microscopy3.82018-10-17
47SYT|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)Electron microscopy4.42022-07-13
57SYU|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)Electron microscopy4.62022-07-13
65K0Y|1|NTransfer RNAtRNA, mRNAOryctolagus cuniculusEukaryaRF00005m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceElectron microscopy5.82016-07-13
76HCQ|1|33Transfer RNAP/E tRNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit collided di-ribosome (collided monosome)Electron microscopy6.52018-10-17

Release history

Release3.239
Date2022-07-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_77343.1NR_all_79851.13.239(3) 6HCQ|1|33, 6HCJ|1|33, 5K0Y|1|N(4) 7SYX|1|i, 7SYW|1|i, 7SYU|1|i, 7SYT|1|i(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_77343.1NR_all_77343.23.240(7) 7SYX|1|i, 7SYW|1|i, 7SYU|1|i, 7SYT|1|i, 6HCQ|1|33, 6HCJ|1|33, 5K0Y|1|N(0) (1) 7SYV|1|i

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16HCQ|1|33Structure of the rabbit collided di-ribosome (collided monosome)ELECTRON MICROSCOPY6.575
26HCJ|1|33Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.875
37SYU|1|iStructure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)ELECTRON MICROSCOPY4.675
47SYT|1|iStructure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)ELECTRON MICROSCOPY4.475
55K0Y|1|Nm48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceELECTRON MICROSCOPY5.875
67SYX|1|iStructure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)ELECTRON MICROSCOPY3.775
77SYW|1|iStructure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)ELECTRON MICROSCOPY3.775
Copyright 2023 BGSU RNA group. Page generated in 0.0036 s