Equivalence class NR_all_95031.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5LJ3|1|U (rep) | U5 spliceosomal RNA | U5 snRNA (small nuclear RNA), Exon 1 (5' exon) of UBC4 pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Structure of the core of the yeast spliceosome immediately after branching | Electron microscopy | 3.8 | 2016-08-03 |
| 2 | 5GMK|1|D | U5 spliceosomal RNA | U5 snRNA, 5'-Exon | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | Electron microscopy | 3.4 | 2016-08-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_95031.1 | NR_all_97279.1 | 2.89 | (1) 5LJ3|1|U | (1) 5GMK|1|D | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_95031.1 | NR_20.0_30457.1 | 2.91 | (2) 5GMK|1|D, 5LJ3|1|U | (0) | (4) 5GAM|1|U, 3JCM|1|F, 5LJ5|1|U, 5GAN|1|U |
| NR_all_95031.1 | NR_3.5_30457.1 | 2.91 | (1) 5GMK|1|D | (1) 5LJ3|1|U | (0) |
| NR_all_95031.1 | NR_4.0_30457.1 | 2.91 | (2) 5LJ3|1|U, 5GMK|1|D | (0) | (3) 5GAM|1|U, 3JCM|1|F, 5GAN|1|U |
| NR_all_95031.1 | NR_all_30457.1 | 2.91 | (2) 5GMK|1|D, 5LJ3|1|U | (0) | (4) 5GAN|1|U, 5GAM|1|U, 3JCM|1|F, 5LJ5|1|U |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).