1A3M Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1A3M_001 | 1/A/4:6, 1/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_002 | 1/A/6:8, 1/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_003 | 2/A/4:6, 2/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_004 | 2/A/6:8, 2/B/19:22 | Decoding loop with one bulged A Not in a motif group | geometric IL_3LOA_003 IL_10023.1 | |
| IL_1A3M_005 | 3/A/4:6, 3/B/22:24 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_51629.2 | |
| IL_1A3M_006 | 3/A/6:8, 3/B/19:22 | No text annotation Not in a motif group | geometric IL_4P3T_002 IL_46796.1 | |
| IL_1A3M_007 | 4/A/4:6, 4/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_008 | 4/A/6:8, 4/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_009 | 5/A/4:6, 5/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_010 | 5/A/6:8, 5/B/19:22 | Decoding loop with one bulged A Not in a motif group | geometric IL_3LOA_003 IL_10023.1 | |
| IL_1A3M_011 | 6/A/4:6, 6/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_012 | 6/A/6:8, 6/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_013 | 7/A/4:6, 7/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_014 | 7/A/6:8, 7/B/19:22 | Decoding loop with one bulged A Not in a motif group | geometric IL_3LOA_003 IL_10023.1 | |
| IL_1A3M_015 | 8/A/4:6, 8/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_016 | 8/A/6:8, 8/B/19:22 | Decoding loop with one bulged A Not in a motif group | geometric IL_3LOA_003 IL_10023.1 | |
| IL_1A3M_017 | 9/A/4:6, 9/B/22:24 | Isolated cWH basepair Not in a motif group | geometric IL_4V88_405 IL_51629.2 | |
| IL_1A3M_018 | 9/A/6:8, 9/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_019 | 10/A/4:6, 10/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_020 | 10/A/6:8, 10/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_021 | 11/A/4:6, 11/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_022 | 11/A/6:8, 11/B/19:22 | No text annotation Not in a motif group | ||
| IL_1A3M_023 | 12/A/4:6, 12/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_024 | 12/A/6:8, 12/B/19:22 | No text annotation Not in a motif group | geometric IL_4P3T_002 IL_46796.1 | |
| IL_1A3M_025 | 13/A/4:6, 13/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_026 | 13/A/6:8, 13/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_027 | 14/A/4:6, 14/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_028 | 14/A/6:8, 14/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_029 | 15/A/4:6, 15/B/22:24 | No text annotation Not in a motif group | geometric IL_3SZX_002 IL_95997.1 | |
| IL_1A3M_030 | 15/A/6:8, 15/B/19:22 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_1A3M_031 | 16/A/4:6, 16/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_032 | 16/A/6:8, 16/B/19:22 | No text annotation Not in a motif group | ||
| IL_1A3M_033 | 17/A/4:6, 17/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_034 | 17/A/6:8, 17/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_035 | 18/A/4:6, 18/B/22:24 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_51629.2 | |
| IL_1A3M_036 | 18/A/6:8, 18/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_037 | 19/A/4:6, 19/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_038 | 19/A/6:8, 19/B/19:22 | Minor groove platform with extra cWW Not in a motif group | geometric IL_5J7L_006 IL_65006.1 | |
| IL_1A3M_039 | 20/A/4:6, 20/B/22:24 | No text annotation Not in a motif group | geometric IL_4NGF_002 IL_95997.1 | |
| IL_1A3M_040 | 20/A/6:8, 20/B/19:22 | Decoding loop with one bulged A Not in a motif group | geometric IL_3LOA_003 IL_10023.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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