1ZDK Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1ZDK_001 | 1/R/10:15 | No text annotation Not in a motif group | geometric HL_5MSF_001 HL_97896.2 | |
| HL_1ZDK_002 | 1/S/10:15 | No text annotation Not in a motif group | geometric HL_5MSF_001 HL_97896.2 | |
| HL_1ZDK_005 | 1/R/10:15 | No text annotation Not in a motif group | ||
| HL_1ZDK_006 | 1/S/10:15 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1ZDK_002 | 1/R/7:9, 1/R/16:17 | Single bulged A Not in a motif group | geometric IL_2C4Q_001 IL_37497.6 | |
| IL_1ZDK_003 | 1/S/7:9, 1/S/16:17 | Single bulged A Not in a motif group | geometric IL_2C4Q_001 IL_37497.6 | |
| IL_1ZDK_006 | 1/R/7:9, 1/R/16:17 | No text annotation Not in a motif group | ||
| IL_1ZDK_007 | 1/S/7:9, 1/S/16:17 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1ZDK_001 | Tandem non-canonical cWW pairs |
Valid loops
No loops found
Problematic loops
No problematic loops
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