2L2J Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2L2J_001 | 1/A/19:24 | UNCG Not in a motif group | geometric HL_5Y85_004 HL_03562.2 | |
| HL_2L2J_002 | 2/A/19:24 | UNCG Not in a motif group | geometric HL_4LFB_031 HL_03562.2 | |
| HL_2L2J_003 | 3/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_004 | 4/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_005 | 5/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_006 | 6/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_007 | 7/A/19:24 | UNCG Not in a motif group | geometric HL_3U4M_001 HL_03562.2 | |
| HL_2L2J_008 | 8/A/19:24 | UNCG Not in a motif group | geometric HL_5Y85_004 HL_03562.2 | |
| HL_2L2J_009 | 9/A/19:24 | UNCG Not in a motif group | geometric HL_4LFB_031 HL_03562.2 | |
| HL_2L2J_010 | 10/A/19:24 | UNCG Not in a motif group | geometric HL_5Y85_004 HL_03562.2 | |
| HL_2L2J_011 | 11/A/19:24 | No text annotation Not in a motif group | geometric HL_6SY6_001 HL_03562.2 | |
| HL_2L2J_012 | 12/A/19:24 | UNCG Not in a motif group | geometric HL_5LYS_002 HL_03562.2 | |
| HL_2L2J_013 | 13/A/19:24 | UNCG Not in a motif group | geometric HL_4LFB_031 HL_03562.2 | |
| HL_2L2J_014 | 14/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_015 | 15/A/19:24 | UNCG Not in a motif group | geometric HL_4LFB_031 HL_03562.2 | |
| HL_2L2J_016 | 16/A/19:24 | No text annotation Not in a motif group | geometric HL_6SY6_001 HL_03562.2 | |
| HL_2L2J_017 | 17/A/19:24 | UNCG Not in a motif group | geometric HL_4LFB_031 HL_03562.2 | |
| HL_2L2J_018 | 18/A/19:24 | UNCG Not in a motif group | geometric HL_5LYS_002 HL_03562.2 | |
| HL_2L2J_019 | 19/A/19:24 | No text annotation Not in a motif group | geometric HL_6CK5_001 HL_03562.2 | |
| HL_2L2J_020 | 20/A/19:24 | UNCG Not in a motif group | geometric HL_5Y85_004 HL_03562.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2L2J_001 | 1/A/4:6, 1/A/37:39 | No text annotation Not in a motif group | geometric IL_1L9A_003 IL_51629.2 | |
| IL_2L2J_002 | 1/A/14:16, 1/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_003 | 2/A/4:6, 2/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_004 | 2/A/14:16, 2/A/27:29 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_95997.1 | |
| IL_2L2J_005 | 3/A/4:6, 3/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_006 | 3/A/14:16, 3/A/27:29 | No text annotation Not in a motif group | geometric IL_6OL3_002 IL_95997.1 | |
| IL_2L2J_007 | 4/A/4:6, 4/A/37:39 | CA cWW Not in a motif group | geometric IL_5ED2_004 IL_95997.1 | |
| IL_2L2J_008 | 4/A/14:16, 4/A/27:29 | No text annotation Not in a motif group | geometric IL_6OL3_002 IL_95997.1 | |
| IL_2L2J_009 | 5/A/4:6, 5/A/37:39 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_010 | 5/A/14:16, 5/A/27:29 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_95997.1 | |
| IL_2L2J_011 | 6/A/4:6, 6/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_51629.2 | |
| IL_2L2J_012 | 6/A/14:16, 6/A/27:29 | UG cWW Not in a motif group | geometric IL_4LFB_061 IL_95997.1 | |
| IL_2L2J_013 | 7/A/4:6, 7/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_014 | 7/A/14:16, 7/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_015 | 8/A/4:6, 8/A/37:39 | No text annotation Not in a motif group | geometric IL_4E48_005 IL_95997.1 | |
| IL_2L2J_016 | 8/A/14:16, 8/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_017 | 9/A/4:6, 9/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_51629.2 | |
| IL_2L2J_018 | 9/A/14:16, 9/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_019 | 10/A/4:6, 10/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_51629.2 | |
| IL_2L2J_020 | 10/A/14:16, 10/A/27:29 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_021 | 11/A/4:6, 11/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_51629.2 | |
| IL_2L2J_022 | 11/A/14:16, 11/A/27:29 | No text annotation Not in a motif group | geometric IL_6OL3_002 IL_95997.1 | |
| IL_2L2J_023 | 12/A/4:6, 12/A/37:39 | No text annotation Not in a motif group | geometric IL_1L9A_003 IL_51629.2 | |
| IL_2L2J_024 | 12/A/14:16, 12/A/27:29 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_95997.1 | |
| IL_2L2J_025 | 13/A/4:6, 13/A/37:39 | No text annotation Not in a motif group | geometric IL_1L9A_003 IL_51629.2 | |
| IL_2L2J_026 | 13/A/14:16, 13/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_027 | 14/A/4:6, 14/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_028 | 14/A/14:16, 14/A/27:29 | UU cWW Not in a motif group | geometric IL_3SZX_003 IL_95997.1 | |
| IL_2L2J_029 | 15/A/4:6, 15/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3SJ2_002 IL_51629.2 | |
| IL_2L2J_030 | 15/A/14:16, 15/A/27:29 | No text annotation Not in a motif group | geometric IL_6IA2_002 IL_95997.1 | |
| IL_2L2J_031 | 16/A/4:6, 16/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_51629.2 | |
| IL_2L2J_032 | 16/A/14:16, 16/A/27:29 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_033 | 17/A/4:6, 17/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_034 | 17/A/14:16, 17/A/27:29 | Isolated cWH basepair Not in a motif group | geometric IL_3SJ2_003 IL_51629.2 | |
| IL_2L2J_035 | 18/A/4:6, 18/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_036 | 18/A/14:16, 18/A/27:29 | No text annotation Not in a motif group | geometric IL_6OL3_002 IL_95997.1 | |
| IL_2L2J_037 | 19/A/4:6, 19/A/37:39 | Isolated cWH basepair Not in a motif group | geometric IL_3SJ2_002 IL_51629.2 | |
| IL_2L2J_038 | 19/A/14:16, 19/A/27:29 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_012 IL_51629.2 | |
| IL_2L2J_039 | 20/A/4:6, 20/A/37:39 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 | |
| IL_2L2J_040 | 20/A/14:16, 20/A/27:29 | No text annotation Not in a motif group | geometric IL_5TBW_079 IL_95997.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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