3J6Y Summary
- Structure Title
- 3J6Y Summary
- Authors
- Release Date
- 2014-06-11
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
- Chains
-
- 5 RNA chains from Saccharomyces cerevisiae, Taura syndrome virus
- 75 other chains
- Compounds
- 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 18S ribosomal RNA, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S22, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, 25S ribosomal RNA, 40S ribosomal protein S30, 40S ribosomal protein S31, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L16, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 5S ribosomal RNA, 60S ribosomal protein L20, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L25, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L28, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L33, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, 60S ribosomal protein L40, 60S ribosomal protein L41, 60S ribosomal protein L42, 60S ribosomal protein L43, 5.8S ribosomal RNA, TSV IRES mRNA, 60S ribosomal protein L1, 60S ribosomal protein L2, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L8, 60S ribosomal protein L9, Guanine nucleotide-binding protein subunit beta-like protein, 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9
Pairwise Interactions
Interactions annotated by FR3D:- 1,893 base-pairs
- 5,243 base-stacking
- 2,090 base-phosphate
- 238 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 3J6Y contains:- 230 internal loops from 0 motif groups
- 115 hairpin loops from 0 motif groups
- 31 three-way junctions
3D Redundancy
3J6Y has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_90506.47 (1)
- NR_20.0_03510.42 (1)
- NR_20.0_99969.1 (1)
- NR_20.0_18586.44 (1)
- NR_all_90506.47 (1)
- NR_all_03510.42 (1)
- NR_all_99969.1 (1)
- NR_all_18586.44 (1)
Similar structures
4V88 4U4Y 4U51 6TNU 4U55 6S47 6FAI 4U53 5JUP 4U50 6Z6K 6Z6J 6RBD 4U53 6SV4 4U3N 6T7I 4U6F 7B7D 4U4Y 4U3N 6SV4 6SV4 4U55 6XIR 6T7T 5M1J 4U4Z 4U4N 4U50 4U51 4U56 4U56 4U4O 4V8Y 6GQ1 5LL6 6I7O 6I7O 6ZCE 3J6X 3J77 3J78 6ZU9 4V8Z 4U4O 7NRD 6XIQ 7NRC 5MC6 6T83 6T83 5JUO 5JUT 5JUU 6RBE 6EML 6GQB 6Y7C 5JUS 6GQV 4V6I 5TBW 5LYB 5ON6 5NDV 5NDV 5NDG 5NDG 5TGM 5TGM 4V7R 4V7R 5DAT 5TGA 5DGE 5NDW 6HHQ 5ON6 4V88 5TBW 7OSA 6HHQ 5OBM 5I4L 5MEI 5NDW 5LYB 5I4L 5MEI 5OBM 7OSM 5DGV 5DGF 4U3U 4U3M 4U4Q 4U4U 4U52 4U3M 4U6F 7RR5 4U4N 4U52 4U4U 4U4Q 6Q8Y 6ZVI 7A1G 4U4R 5DC3 5DAT 5TGA 5DGV 5DGE 5DGF 5DC3 6T4Q 4U4R 6WOO 6TB3 6SNT 4U3U 4U4ZStructures from NR_all_03510.42