4V6I Summary

View in PDB or NAKB
Structure Title
4V6I Summary
Authors
Release Date
2014-07-09
Experimental technique
ELECTRON MICROSCOPY
Resolution
8.8 Å
Chains
  • 6 RNA chains from Saccharomyces cerevisiae
  • 80 other chains
Compounds
40S ribosomal protein rpS0 (S2p), 40S ribosomal protein rpS3 (S3p), 40S ribosomal protein rpS9 (S4p), 40S ribosomal protein rpS4 (S4e), 40S ribosomal protein rpS2 (S5p), 40S ribosomal protein rpS5 (S7p), 40S ribosomal protein rpS7 (S7e), 40S ribosomal protein rpS22 (S8p), 40S ribosomal protein rpS16 (S9p), 40S ribosomal protein rpS20 (S10p), 40S ribosomal protein rpS14 (S11p), 40S ribosomal protein rpS23 (S12p), 40S ribosomal protein rpS18 (S13p), 40S ribosomal protein rpS29 (S14p), 40S ribosomal protein rpS13 (S15p), 40S ribosomal protein rpS11 (S17p), 40S ribosomal protein rpS17 (S17e), 40S ribosomal protein rpS15 (S19p), 40S ribosomal protein rpS19 (S19e), 40S ribosomal protein rpS21 (S21e), 40S ribosomal protein S24, 40S ribosomal protein rpS25 (S25e), 40S ribosomal protein rpS26 (S26e), 40S ribosomal protein rpS27 (S27e), 40S ribosomal protein rpS28 (S28e), 40S ribosomal protein rpS30 (S30e), 40S ribosomal protein RACK1 (RACK1), Unknown 40S ribosomal protein XS1, Unknown 40S ribosomal protein XS2, 60S ribosomal protein rpL1 (L1p), 60S ribosomal protein rpL2 (L2p), 60S ribosomal protein rpL3 (L3p), 60S ribosomal protein rpL4 (L4p), 60S ribosomal protein rpL11 (L5p), 60S ribosomal protein rpL9 (L6p), 60S ribosomal protein rpL6 (L6e), 60S ribosomal protein rpL8 (L7ae), 60S ribosomal protein rpL10 (L10e), 60S ribosomal protein rpL12 (L11p), 60S ribosomal protein rpL16 (L13p), 60S ribosomal protein rpL13 (L13e), 60S ribosomal protein rpL23 (L14p), 60S ribosomal protein rpL14 (L14e), 60S ribosomal protein rpL28 (L15p), 60S ribosomal protein rpL15 (L15e), 60S ribosomal protein rpL5 (L18p), 60S ribosomal protein rpL18 (L18e), 60S ribosomal protein rpL20 (L18ae), 60S ribosomal protein rpL19 (L19e), 60S ribosomal protein rpL21 (L21e), 60S ribosomal protein rpL17 (L22p), 60S ribosomal protein rpL22 (L22e), 60S ribosomal protein rpL25 (L23p), 60S ribosomal protein rpL26 (L24p), 60S ribosomal protein rpL24 (L24e), 60S ribosomal protein rpL27 (L27e), 60S ribosomal protein rpL35 (L29p), 60S ribosomal protein rpL29 (L29e), 60S ribosomal protein rpL7 (L30p), 60S ribosomal protein rpL30 (L30e), 60S ribosomal protein rpL31 (L31e), 60S ribosomal protein pL32 (L32e), 60S ribosomal protein rpL34 (L34e), 60S ribosomal protein rpL33 (L35ae), 60S ribosomal protein rpL36 (L36e), 60S ribosomal protein rpL37 (L37e), 60S ribosomal protein rpL43 (L37ae), 60S ribosomal protein rpL38 (L38e), 60S ribosomal protein rpL39 (L39e), 60S ribosomal protein rpL40 (L40e), 60S ribosomal protein rpL41 (L41e), 60S ribosomal protein rpL42 (L44e), 60S acidic ribosomal protein rpP0 (L10P), 60S acidic ribosomal protein rpP11 (P1), 60S acidic ribosomal protein rpP11 (P1), 60S acidic ribosomal protein (P2), 60S acidic ribosomal protein (P2), Unknown protein, Unknown protein, Unknown protein, 18S rRNA, P-SITE TRNA ASP, MRNA, RNA (5'-R(P*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3'), 25S rRNA, 5.8S rRNA, 5S rRNA

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 4V6I contains:
  • 207 internal loops from 0 motif groups
  • 112 hairpin loops from 0 motif groups
  • 28 three-way junctions
More

3D Redundancy

4V6I has chains which belong to the following equivalence classes in the current representative set:

Similar structures

None found
RNA 3D Hub //
Copyright 2024 BGSU RNA group. Page generated in 0.2865 s