6EML Summary
- Structure Title
- 6EML Summary
- Authors
- Release Date
- 2017-11-29
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
- Chains
-
- 1 RNA chain from Saccharomyces cerevisiae
- 31 other chains
- Compounds
- pre-18S ribosomal RNA, 40S ribosomal protein S5, 40S ribosomal protein S17-A, 40S ribosomal protein S12, 40S ribosomal protein S15, 40S ribosomal protein S16-A, 40S ribosomal protein S18-A, 40S ribosomal protein S19-A, 40S ribosomal protein S25-A, 40S ribosomal protein S28-B, Ubiquitin-40S ribosomal protein S31, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, 40S ribosomal protein S2, 40S ribosomal protein S4-A, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S11-A, 40S ribosomal protein S13, 40S ribosomal protein S14-A, 40S ribosomal protein S21-A, 40S ribosomal protein S22-A, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, Essential nuclear protein 1, 40S ribosomal protein S27-A, 40S ribosomal protein S30-A, Pre-rRNA-processing protein PNO1, Serine/threonine-protein kinase RIO2, Ribosome biogenesis protein TSR1
Pairwise Interactions
Interactions annotated by FR3D:- 553 base-pairs
- 1,574 base-stacking
- 650 base-phosphate
- 71 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6EML contains:- 84 internal loops from 0 motif groups
- 35 hairpin loops from 0 motif groups
- 12 three-way junctions
3D Redundancy
6EML has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_03510.57 (1)
- NR_4.0_03510.57 (1)
- NR_all_03510.57 (1)
Similar structures
4V88 5TBW 4V88 5TBW 7OSA 6HHQ 5OBM 5I4L 5MEI 5NDW 5LYB 5I4L 5OBM 7OSM 5MEI 5ON6 5NDW 6HHQ 5LYB 5NDV 5NDV 5ON6 5NDG 5NDG 5TGM 5TGM 4V7R 4V7R 5DAT 5TGA 5DGE 5DGV 5DGF 5DC3 5DAT 5TGA 5DGV 5DGE 5DGF 5DC3 8CCS 8CDR 8CEH 8EVP 7ZW0 8BN3 8EWC 7ZUX 8CGN 8EUB 8CIV 6T4Q 7MPJ 8EVQ 8CG8 6WOO 8EWB 4U4R 6TB3 6SNT 8CF5 4U4R 4U3U 8CDL 7A1G 6ZVI 8CAH 8EVT 4U3U 7N8B 7MPI 8C01 4U3M 4U4Q 4U4U 4U52 4U3M 7RR5 4U52 4U4U 4U6F 4U4Q 4U4N 6Q8Y 4U6F 4U4Z 6XIR 7B7D 8CAS 6SV4 6SV4 4U4Y 4U3N 4U4Z 6T7T 4U55 5M1J 4U4N 8CKU 6T7I 4U50 4U51 4U3N 6S47 4U4Y 4U51 8C00 7ZPQ 4U55 8EVS 6TNU 6Z6K 6Z6J 6FAI 4U50 5JUP 4U53 6RBD 8Y0U 4U53 6SV4 8EVR 4U56 6LQP 4U56 8BQX 8C83 7NRC 8BQD 5MC6 6KE6 6T83 6T83 5JUO 6RBE 5JUT 8CMJ 5JUU 6Y7C 6GQB 7WTR 5JUS 6XIQ 6GQV 7ZUW 7NRD 6ZQG 4U4O 7WTN 7WTL 4U4O 7WTO 6LQU 7WTP 4V8Y 7WTM 7WTQ 7D4I 6ZQD 6GQ1 7AJU 6LQS 5LL6 6LQQ 7SUK 6ZQB 6ZQC 7ZRS 5WLC 6I7O 7D5S 5WYK 6I7O 6ZCE 7AJT 6LQT 6LQV 3J6Y 3J6X 3J77 3J78 6ZU9 6ZQF 4V8Z 7D5T 5TZS 6ZQE 6LQR 5WYJ 4V6I 7D63Structures from NR_all_03510.57