Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6QNR_0011/13/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_6QNR_0031/13/157:164No text annotation
Not in a motif group
HL_6QNR_0041/13/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_6QNR_0051/13/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_6QNR_0061/13/258:268No text annotation
Not in a motif group
geometric
HL_4WSM_226
HL_22031.1
HL_6QNR_0071/13/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.1
HL_6QNR_0081/13/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_6QNR_0101/13/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.1
HL_6QNR_0111/13/419:424No text annotation
Not in a motif group
homologous
HL_6CZR_082
HL_03562.2
HL_6QNR_0121/13/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_6QNR_0131/13/521:528No text annotation
Not in a motif group
geometric
HL_1WZ2_007
HL_10278.1
HL_6QNR_0141/13/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_6QNR_0151/13/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_6QNR_0161/13/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_6QNR_0171/13/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_6QNR_0181/13/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_6QNR_0191/13/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_6QNR_0201/13/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_6QNR_0211/13/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_6QNR_0221/13/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_6QNR_0231/13/1028A:1032BNo text annotation
Not in a motif group
HL_6QNR_0241/13/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.1
HL_6QNR_0251/13/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_6QNR_0261/13/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_6QNR_0271/13/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_6QNR_0281/13/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_6QNR_0291/13/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_6QNR_0301/13/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_6QNR_0311/13/1449:1454No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_6QNR_0321/13/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_6QNR_0331/14/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_6QNR_0341/14/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_6QNR_0351/14/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_6QNR_0361/14/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_6QNR_0381/14/194:201No text annotation
Not in a motif group
geometric
HL_4V9F_006
HL_06192.2
HL_6QNR_0391/14/225:230No text annotation
Not in a motif group
homologous
HL_7A0S_007
HL_02862.2
HL_6QNR_0401/14/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_6QNR_0411/14/270J:270PNo text annotation
Not in a motif group
HL_6QNR_0421/14/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_6QNR_0431/14/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_6QNR_0441/14/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_6QNR_0451/14/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_6QNR_0461/14/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_6QNR_0471/14/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_6QNR_0481/14/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_6QNR_0491/14/544:549No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_6QNR_0501/14/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_6QNR_0511/14/611:617No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_6QNR_0521/14/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_6QNR_0531/14/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_6QNR_0541/14/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_6QNR_0551/14/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_6QNR_0561/14/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_6QNR_0571/14/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_6QNR_0591/14/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_42097.1
HL_6QNR_0601/14/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_6QNR_0611/14/1170:1179No text annotation
Not in a motif group
HL_6QNR_0621/14/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_6QNR_0631/14/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_6QNR_0641/14/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_6QNR_0651/14/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_6QNR_0661/14/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_6QNR_0671/14/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_6QNR_0681/14/1491:1499No text annotation
Not in a motif group
geometric
HL_2A43_001
HL_26881.1
HL_6QNR_0691/14/1532:1539No text annotation
Not in a motif group
HL_6QNR_0701/14/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_6QNR_0711/14/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_6QNR_0721/14/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_6QNR_0731/14/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_6QNR_0741/14/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_6QNR_0751/14/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_6QNR_0761/14/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_6QNR_0771/14/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_6QNR_0781/14/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_6QNR_0791/14/1909:1921No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_6QNR_0801/14/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_6QNR_0811/14/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_6QNR_0821/14/2142:2149No text annotation
Not in a motif group
HL_6QNR_0831/14/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_6QNR_0841/14/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_6QNR_0851/14/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_6QNR_0861/14/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_6QNR_0871/14/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6QNR_0881/14/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_6QNR_0891/14/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_6QNR_0901/14/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_6QNR_0921/14/2527:2536tRNA anticodon loop
Not in a motif group
geometric
HL_3W3S_002
HL_53597.2
HL_6QNR_0931/14/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_6QNR_0941/14/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_6QNR_0951/14/2658:2663GNRA
Not in a motif group
geometric
HL_4QLM_001
HL_30784.2
HL_6QNR_0961/14/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_6QNR_0971/14/2745:2759No text annotation
Not in a motif group
homologous
HL_7A0S_065
HL_56677.7
HL_6QNR_0991/14/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_6QNR_1001/14/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_6QNR_1011/16/38:44No text annotation
Not in a motif group
geometric
HL_7RQB_070
HL_87939.1
HL_6QNR_1021/16/86:90GNRA
Not in a motif group
homologous
HL_4V9F_072
HL_42097.1
HL_6QNR_1031/1G/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_6QNR_1051/1G/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.1
HL_6QNR_1061/1G/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_6QNR_1071/1G/200:217No text annotation
Not in a motif group
homologous
HL_6CZR_076
HL_34168.2
HL_6QNR_1081/1G/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_6QNR_1091/1G/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_42097.1
HL_6QNR_1101/1G/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_6QNR_1111/1G/342:347UNCG
Not in a motif group
homologous
HL_4LFB_009
HL_03562.2
HL_6QNR_1121/1G/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_6QNR_1131/1G/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_6QNR_1141/1G/457:475No text annotation
Not in a motif group
geometric
HL_3RG5_006
HL_49288.1
HL_6QNR_1151/1G/521:528No text annotation
Not in a motif group
geometric
HL_4V9F_003
HL_52841.1
HL_6QNR_1161/1G/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_6QNR_1171/1G/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_6QNR_1181/1G/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_6QNR_1191/1G/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_6QNR_1201/1G/838:848No text annotation
Not in a motif group
HL_6QNR_1211/1G/862:867GNRA
Not in a motif group
homologous
HL_5J7L_019
HL_42097.1
HL_6QNR_1221/1G/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.1
HL_6QNR_1231/1G/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_6QNR_1241/1G/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_6QNR_1261/1G/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_6QNR_1271/1G/1089:1096No text annotation
Not in a motif group
homologous
HL_5J7L_024
HL_71554.2
HL_6QNR_1281/1G/1133:1141No text annotation
Not in a motif group
geometric
HL_5TBW_021
HL_33817.1
HL_6QNR_1291/1G/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_6QNR_1301/1G/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_6QNR_1311/1G/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_6QNR_1321/1G/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_6QNR_1331/1G/1449:1454No text annotation
Not in a motif group
geometric
HL_4TUW_002
HL_65572.2
HL_6QNR_1341/1G/1515:1520No text annotation
Not in a motif group
homologous
HL_6CZR_103
NA
HL_6QNR_1351/1H/58:67No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_6QNR_1361/1H/86:94No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_6QNR_1371/1H/121:126No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_75407.1
HL_6QNR_1381/1H/136:141No text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_6QNR_1391/1H/154:162No text annotation
Not in a motif group
HL_6QNR_1401/1H/184:191No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_6QNR_1411/1H/215:220No text annotation
Not in a motif group
homologous
HL_7A0S_007
HL_02862.2
HL_6QNR_1421/1H/236:242No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_6QNR_1431/1H/270:276No text annotation
Not in a motif group
geometric
HL_4WRT_001
HL_27930.1
HL_6QNR_1441/1H/330:337No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_6QNR_1451/1H/344:348No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_6QNR_1461/1H/352:360No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_6QNR_1471/1H/410:420No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_6QNR_1481/1H/438:445No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_6QNR_1491/1H/489:494No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_6QNR_1501/1H/514:519No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_6QNR_1511/1H/569:574GNRA
Not in a motif group
geometric
HL_3V7E_003
HL_42097.1
HL_6QNR_1521/1H/590:599No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_6QNR_1531/1H/636:642No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_6QNR_1541/1H/655:660No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_6QNR_1551/1H/667:673No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_6QNR_1571/1H/760:767No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_6QNR_1581/1H/792:801No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_6QNR_1591/1H/827:833No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_6QNR_1601/1H/874:879No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_6QNR_1621/1H/1001:1008No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_6QNR_1631/1H/1025:1032No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_6QNR_1651/1H/1217:1225No text annotation
Not in a motif group
geometric
HL_5J7L_018
HL_34168.2
HL_6QNR_1661/1H/1269:1274No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_6QNR_1671/1H/1328:1336No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_6QNR_1681/1H/1371:1377No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_6QNR_1691/1H/1410:1415No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_6QNR_1701/1H/1436:1445No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_6QNR_1711/1H/1500:1507No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_6QNR_1721/1H/1539:1545No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_6QNR_1741/1H/1613:1616No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_6QNR_1751/1H/1659:1666No text annotation
Not in a motif group
homologous
HL_7A0S_040
HL_64430.2
HL_6QNR_1761/1H/1678:1683No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_6QNR_1771/1H/1739:1744UNCG
Not in a motif group
homologous
HL_5J7L_175
HL_03562.2
HL_6QNR_1781/1H/1766:1772No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_6QNR_1791/1H/1784:1788No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_6QNR_1801/1H/1809:1819No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_6QNR_1811/1H/1838:1843No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_6QNR_1821/1H/1896:1901No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_6QNR_1831/1H/1932:1944No text annotation
Not in a motif group
homologous
HL_7RQB_048
NA
HL_6QNR_1841/1H/1972:1980No text annotation
Not in a motif group
homologous
HL_7A0S_048
HL_51824.1
HL_6QNR_1851/1H/2050:2059No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_6QNR_1861/1H/2166:2171UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_6QNR_1871/1H/2227:2232No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_6QNR_1881/1H/2261:2269No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_6QNR_1891/1H/2277:2289No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_6QNR_1901/1H/2316:2326No text annotation
Not in a motif group
homologous
HL_5J7L_188
HL_11805.3
HL_6QNR_1911/1H/2337:2344No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_6QNR_1921/1H/2368:2375No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_6QNR_1931/1H/2387:2392No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_6QNR_1941/1H/2417:2426No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_6QNR_1951/1H/2484:2492No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_6QNR_1961/1H/2541:2548No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_6QNR_1971/1H/2564:2570No text annotation
Not in a motif group
homologous
HL_7RQB_062
NA
HL_6QNR_1981/1H/2607:2612No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_6QNR_1991/1H/2671:2676GNRA
Not in a motif group
geometric
HL_5J7L_197
HL_42097.1
HL_6QNR_2001/1H/2714:2719No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_6QNR_2011/1H/2759:2773No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_6QNR_2031/1H/2830:2838No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_6QNR_2041/1H/2867:2872No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_6QNR_2051/1J/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.1
HL_6QNR_2061/1J/86:90No text annotation
Not in a motif group
HL_6QNR_2081/1K/30:40No text annotation
Not in a motif group
homologous
HL_1B23_002
NA
HL_6QNR_2091/1K/53:61No text annotation
Not in a motif group
homologous
HL_1H4S_003
NA
HL_6QNR_2101/1L/12:24No text annotation
Not in a motif group
HL_6QNR_2111/1L/30:40No text annotation
Not in a motif group
homologous
HL_1B23_002
NA
HL_6QNR_2121/1L/53:61No text annotation
Not in a motif group
homologous
HL_6CFJ_108
NA
HL_6QNR_2131/2K/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_6QNR_2141/2K/30:40No text annotation
Not in a motif group
homologous
HL_5EL4_222
NA
HL_6QNR_2151/2K/53:61No text annotation
Not in a motif group
homologous
HL_6CFJ_108
NA
HL_6QNR_2161/2L/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_6QNR_2171/2L/30:40No text annotation
Not in a motif group
homologous
HL_5EL4_222
NA
HL_6QNR_2181/2L/53:61No text annotation
Not in a motif group
homologous
HL_6CFJ_108
NA
HL_6QNR_2191/3K/12:23No text annotation
Not in a motif group
HL_6QNR_2211/3K/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4LCK_003
HL_22280.1
HL_6QNR_2221/3L/13:22No text annotation
Not in a motif group
homologous
HL_5E81_219
NA
HL_6QNR_2231/3L/29:41No text annotation
Not in a motif group
homologous
HL_6GSL_221
HL_06285.2
HL_6QNR_2241/3L/49:65No text annotation
Not in a motif group
homologous
HL_5E81_221
NA
HL_6QNR_2251/5K/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_6QNR_2261/5K/30:40No text annotation
Not in a motif group
homologous
HL_1B23_002
NA
HL_6QNR_2271/5K/53:61No text annotation
Not in a motif group
homologous
HL_1FIR_003
NA

Problematic loops

#loop idProblemSequence
HL_6QNR_002No text annotation
HL_6QNR_009No text annotation
HL_6QNR_037No text annotation
HL_6QNR_058No text annotation
HL_6QNR_091No text annotation
HL_6QNR_098No text annotation
HL_6QNR_104No text annotation
HL_6QNR_125No text annotation
HL_6QNR_156No text annotation
HL_6QNR_161No text annotation
HL_6QNR_164No text annotation
HL_6QNR_173No text annotation
HL_6QNR_202No text annotation
HL_6QNR_207No text annotation
HL_6QNR_220No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6QNR_0011/13/30:32,
1/13/552:553
Single bulged G
Not in a motif group
homologous
IL_4LFB_001
IL_00225.2
IL_6QNR_0021/13/44:45,
1/13/396:398
Single bulged A
Not in a motif group
homologous
IL_4LFB_002
IL_37497.2
IL_6QNR_0031/13/47:52,
1/13/359:361
No text annotation
Not in a motif group
homologous
IL_4LFB_003
IL_11178.1
IL_6QNR_0041/13/54:56,
1/13/356:357
Minor groove platform
Not in a motif group
homologous
IL_4LFB_004
IL_93353.1
IL_6QNR_0051/13/63:66,
1/13/103:104
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_005
IL_76389.1
IL_6QNR_0061/13/67:69,
1/13/99:102
No text annotation
Not in a motif group
homologous
IL_4LFB_006
IL_95997.1
IL_6QNR_0071/13/129:131,
1/13/231:232
Multiple bulged bases
Not in a motif group
homologous
IL_4LFB_007
IL_16396.2
IL_6QNR_0081/13/132:136,
1/13/227:230
No text annotation
Not in a motif group
homologous
IL_4LFB_008
IL_58764.3
IL_6QNR_0091/13/147:153,
1/13/168:175
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_5J7L_012
IL_80604.2
IL_6QNR_0101/13/185:186B,
1/13/191E:192
No text annotation
Not in a motif group
IL_6QNR_0111/13/242:247,
1/13/277:284
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4LFB_011
IL_45067.2
IL_6QNR_0121/13/249:252,
1/13/274:275
No text annotation
Not in a motif group
homologous
IL_4LFB_012
IL_48100.2
IL_6QNR_0131/13/292:293,
1/13/304:308
C-loop
Not in a motif group
homologous
IL_4LFB_013
IL_37712.2
IL_6QNR_0141/13/367:369,
1/13/392:393
Single bulged U
Not in a motif group
homologous
IL_4LFB_014
IL_83039.13
IL_6QNR_0151/13/371:375,
1/13/389:390
C-loop
Not in a motif group
geometric
IL_4LFB_015
IL_75255.1
IL_6QNR_0161/13/375:376,
1/13/387:389
Single bulged G
Not in a motif group
homologous
IL_4LFB_016
IL_00225.2
IL_6QNR_0171/13/409:416,
1/13/427:433
No text annotation
Not in a motif group
homologous
IL_4LFB_017
IL_28026.1
IL_6QNR_0181/13/446:450,
1/13/483:488
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_4LFB_018
IL_88269.3
IL_6QNR_0191/13/450:455,
1/13/477:483
No text annotation
Not in a motif group
homologous
IL_4LFB_019
IL_11882.1
IL_6QNR_0201/13/504:511,
1/13/540:541
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5J7L_024
IL_15861.7
IL_6QNR_0211/13/515:521,
1/13/528:536
No text annotation
Not in a motif group
homologous
IL_4LFB_021
NA
IL_6QNR_0221/13/569:575,
1/13/880:881
No text annotation
Not in a motif group
homologous
IL_4LFB_022
IL_69996.1
IL_6QNR_0231/13/580:584,
1/13/757:761
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_023
IL_17136.1
IL_6QNR_0241/13/594:596,
1/13/644:645
Major groove platform
Not in a motif group
homologous
IL_4LFB_024
IL_27635.1
IL_6QNR_0251/13/597:598,
1/13/640:643
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_029
IL_09061.6
IL_6QNR_0261/13/605:612,
1/13/628:633
No text annotation
Not in a motif group
homologous
IL_4LFB_026
IL_78349.1
IL_6QNR_0271/13/654:655,
1/13/751:754
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4LFB_027
IL_50694.2
IL_6QNR_0281/13/657:658,
1/13/747:749
Major groove platform
Not in a motif group
homologous
IL_4LFB_028
IL_27635.1
IL_6QNR_0291/13/662:666,
1/13/740:743
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4LFB_029
IL_71110.1
IL_6QNR_0301/13/673:678,
1/13/712:717
No text annotation
Not in a motif group
geometric
IL_5J7L_034
IL_04668.1
IL_6QNR_0311/13/683:688,
1/13/699:707
Kink-turn
Not in a motif group
homologous
IL_4LFB_031
IL_37722.1
IL_6QNR_0321/13/774:778,
1/13/804:805
Left turn
Not in a motif group
homologous
IL_4LFB_032
IL_29346.1
IL_6QNR_0331/13/779:783,
1/13/799:803
tSH-tHW-tHS
Not in a motif group
homologous
IL_4LFB_033
IL_17136.1
IL_6QNR_0341/13/887:894,
1/13/905:910
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4LFB_034
IL_24606.2
IL_6QNR_0351/13/922:923,
1/13/1393:1395
Single bulged A
Not in a motif group
homologous
IL_4LFB_035
IL_37497.2
IL_6QNR_0361/13/925:927,
1/13/1390:1391
Single bulged G
Not in a motif group
homologous
IL_5J7L_040
IL_00225.2
IL_6QNR_0371/13/933:936,
1/13/1379:1384
No text annotation
Not in a motif group
geometric
IL_6CZR_149
IL_93211.1
IL_6QNR_0381/13/953:954,
1/13/1226:1228
Minor groove platform
Not in a motif group
homologous
IL_4LFB_038
IL_42622.2
IL_6QNR_0391/13/993:998A,
1/13/1042:1045
No text annotation
Not in a motif group
IL_6QNR_0401/13/1048:1050,
1/13/1208:1209
Single bulged U
Not in a motif group
homologous
IL_4LFB_042
IL_83039.13
IL_6QNR_0411/13/1050:1052,
1/13/1206:1208
No text annotation
Not in a motif group
geometric
IL_4WF9_042
IL_95997.1
IL_6QNR_0421/13/1052:1056,
1/13/1204:1206
Isolated cWS basepair
Not in a motif group
geometric
IL_4LFB_044
IL_76319.2
IL_6QNR_0431/13/1057:1058,
1/13/1199:1203
Minor groove platform
Not in a motif group
homologous
IL_4LFB_045
IL_93353.1
IL_6QNR_0441/13/1060:1061,
1/13/1195:1197
Single bulged U
Not in a motif group
homologous
IL_4LFB_046
IL_83039.13
IL_6QNR_0451/13/1061:1063,
1/13/1193:1195
No text annotation
Not in a motif group
geometric
IL_4LFB_047
IL_95997.1
IL_6QNR_0461/13/1124:1128,
1/13/1144:1149
No text annotation
Not in a motif group
homologous
IL_5J7L_051
IL_93211.1
IL_6QNR_0471/13/1129:1132,
1/13/1142:1143
Minor groove platform
Not in a motif group
homologous
IL_5J7L_052
IL_15052.1
IL_6QNR_0481/13/1158:1161,
1/13/1175:1181
No text annotation
Not in a motif group
geometric
IL_4LFB_050
IL_42032.1
IL_6QNR_0491/13/1247:1253,
1/13/1284:1290
No text annotation
Not in a motif group
homologous
IL_4LFB_051
IL_09129.1
IL_6QNR_0501/13/1255:1258,
1/13/1277:1282
No text annotation
Not in a motif group
homologous
IL_4LFB_052
IL_84205.1
IL_6QNR_0511/13/1259:1260,
1/13/1274:1276
Not an internal loop
Not in a motif group
geometric
IL_4LFB_053
IL_93353.1
IL_6QNR_0521/13/1260:1262,
1/13/1273:1274
Minor groove platform
Not in a motif group
homologous
IL_4LFB_054
IL_93353.1
IL_6QNR_0531/13/1303:1308,
1/13/1329:1334
No text annotation
Not in a motif group
geometric
IL_4LFB_055
IL_19954.2
IL_6QNR_0541/13/1399:1401,
1/13/1501:1504
No text annotation
Not in a motif group
geometric
IL_4V88_463
IL_36143.3
IL_6QNR_0551/13/1401:1405,
1/13/1496:1501
No text annotation
Not in a motif group
IL_6QNR_0561/13/1405:1409,
1/13/1491:1496
No text annotation
Not in a motif group
homologous
IL_4LFB_058
NA
IL_6QNR_0571/13/1412:1414,
1/13/1486:1488
No text annotation
Not in a motif group
homologous
IL_5J7L_061
IL_95997.1
IL_6QNR_0581/13/1416:1419,
1/13/1481:1484
Double sheared
Not in a motif group
homologous
IL_5J7L_062
IL_09705.9
IL_6QNR_0591/13/1431:1435,
1/13/1466:1469
UAA/GAN variation
Not in a motif group
geometric
IL_4LFB_062
IL_07235.1
IL_6QNR_0601/13/1435:1437,
1/13/1464:1466
No text annotation
Not in a motif group
homologous
IL_4LFB_063
IL_95997.1
IL_6QNR_0611/13/1440:1447,
1/13/1459:1461
No text annotation
Not in a motif group
homologous
IL_4LFB_064
IL_92788.2
IL_6QNR_0621/14/24:30,
1/14/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_6QNR_0631/14/36:37,
1/14/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_6QNR_0641/14/43:45,
1/14/433:436
Major groove platform with extra cWW
Not in a motif group
geometric
IL_4V9F_003
IL_18471.2
IL_6QNR_0651/14/81:85,
1/14/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_6QNR_0661/14/183:184,
1/14/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_6QNR_0671/14/188:194,
1/14/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_6QNR_0681/14/239:245,
1/14/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_6QNR_0691/14/271:272,
1/14/365:366
No text annotation
Not in a motif group
IL_6QNR_0701/14/273:273A,
1/14/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.1
IL_6QNR_0711/14/273F:279,
1/14/361:363
No text annotation
Not in a motif group
IL_6QNR_0721/14/280:284,
1/14/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_6QNR_0731/14/288:290,
1/14/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_6QNR_0741/14/293:295,
1/14/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_6QNR_0751/14/481:484,
1/14/496:509
No text annotation
Not in a motif group
geometric
IL_7RQB_014
IL_60992.6
IL_6QNR_0761/14/564:566,
1/14/575:577
No text annotation
Not in a motif group
homologous
IL_7RQB_015
IL_95997.1
IL_6QNR_0771/14/606:609A,
1/14/618A:622
AAA cross-strand stack
Not in a motif group
homologous
IL_4WF9_019
IL_17136.1
IL_6QNR_0781/14/672:674,
1/14/806:808
No text annotation
Not in a motif group
geometric
IL_7RQB_017
IL_95997.1
IL_6QNR_0791/14/674:678,
1/14/799:806
tHW-tHW cross-strand stack
Not in a motif group
homologous
IL_4WF9_021
IL_17470.6