6WOO Summary
- Structure Title
- 6WOO Summary
- Authors
- Release Date
- 2020-09-23
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
- Chains
-
- 6 RNA chains from Saccharomyces cerevisiae
- 78 other chains
- Compounds
- eIF5B, 18S ribosomal RNA, Met-tRNA-iMet, mRNA, 25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal rRNA, uL2, uS2, uL3, eS1, uL4, uS5, uL18, uS3, eL6, eS4, uL30, uS7, eL8, eS6, uL6, eS7, uL16, eS8, uL5, uS4, L10, eS10, eL13, uS17, eL14, eS12, eL15, uS15, uL13, uS11, uL22, uS19, eL18, uS19, eL19, eS17, eL20, uS13, eL21, eS19, eL22, uS10, uL14, eS21, eL24, uS8, uL23, uS12, uL24, eS24, eL27, eS25, uL15, eS26, eL29, eS27, eL30, eS28, eL31, uS14, eL32, eS30, eL33, eS31, eL34, RACK1, uL29, eL36, eL37, eL38, eL39, eL40, eL41, eL42, eL43, uL1, uL10
Pairwise Interactions
Interactions annotated by FR3D:- 2,070 base-pairs
- 5,284 base-stacking
- 2,208 base-phosphate
- 278 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6WOO contains:- 236 internal loops from 0 motif groups
- 116 hairpin loops from 0 motif groups
- 29 three-way junctions
3D Redundancy
6WOO has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_90506.47 (1)
- NR_20.0_37355.1 (1) rep
- NR_20.0_03510.42 (1)
- NR_20.0_18586.44 (1)
- NR_3.0_90506.47 (1)
- NR_3.0_37355.1 (1) rep
- NR_3.0_03510.42 (1)
- NR_3.0_18586.44 (1)
- NR_3.5_90506.47 (1)
- NR_3.5_37355.1 (1) rep
- NR_3.5_03510.42 (1)
- NR_3.5_18586.44 (1)
- NR_4.0_90506.47 (1)
- NR_4.0_37355.1 (1) rep
- NR_4.0_03510.42 (1)
- NR_4.0_18586.44 (1)
- NR_all_90506.47 (1)
- NR_all_37355.1 (1) rep
- NR_all_03510.42 (1)
- NR_all_18586.44 (1)
Similar structures
4V88 4U4Y 4U51 6TNU 4U55 6S47 6FAI 4U53 5JUP 4U50 6Z6K 6Z6J 6RBD 4U53 6SV4 4U3N 6T7I 4U6F 7B7D 4U4Y 4U3N 6SV4 6SV4 4U55 6XIR 6T7T 5M1J 4U4Z 4U4N 4U50 4U51 4U56 4U56 4U4O 4V8Y 6GQ1 5LL6 6I7O 6I7O 6ZCE 3J6Y 3J6X 3J77 3J78 6ZU9 4V8Z 4U4O 7NRD 6XIQ 7NRC 5MC6 6T83 6T83 5JUO 5JUT 5JUU 6RBE 6EML 6GQB 6Y7C 5JUS 6GQV 4V6I 5TBW 5LYB 5ON6 5NDV 5NDV 5NDG 5NDG 5TGM 5TGM 4V7R 4V7R 5DAT 5TGA 5DGE 5NDW 6HHQ 5ON6 4V88 5TBW 7OSA 6HHQ 5OBM 5I4L 5MEI 5NDW 5LYB 5I4L 5MEI 5OBM 7OSM 5DGV 5DGF 4U3U 4U3M 4U4Q 4U4U 4U52 4U3M 4U6F 7RR5 4U4N 4U52 4U4U 4U4Q 6Q8Y 6ZVI 7A1G 4U4R 5DC3 5DAT 5TGA 5DGV 5DGE 5DGF 5DC3 6T4Q 4U4R 6TB3 6SNT 4U3U 4U4ZStructures from NR_all_03510.42