6X7F Summary

View in PDB or NDB
Structure Title
6X7F Summary
Authors
Release Date
2020-09-02
Experimental technique
ELECTRON MICROSCOPY
Resolution
3.5 Å
Chains
  • 6 RNA chains from synthetic construct, Escherichia coli
  • 62 other chains
Compounds
50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, NT DNA, T DNA, mRNA with 24 nt long spacer, 50S ribosomal protein L10, E-site and P-site tRNA (fMet), DNA-directed RNA polymerase subunit beta, Transcription termination/antitermination protein NusG, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit omega, Transcription termination/antitermination protein NusA, E-site and P-site tRNA (fMet), 30S ribosomal protein S18, 16S rRNA, 30S ribosomal protein S20, 30S ribosomal protein S21, 30S ribosomal protein S2, 30S ribosomal protein S1, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S19, 30S ribosomal protein S13, 50S ribosomal protein L11, 50S ribosomal protein L7/L12, 23S rRNA, 50S ribosomal protein L27, 50S ribosomal protein L28, 5S rRNA, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L2, 50S ribosomal protein L32, 50S ribosomal protein L3, 50S ribosomal protein L33, 50S ribosomal protein L4, 50S ribosomal protein L34, 50S ribosomal protein L5, 50S ribosomal protein L35, 50S ribosomal protein L6, 50S ribosomal protein L36, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 6X7F contains:
  • 185 internal loops from 0 motif groups
  • 108 hairpin loops from 0 motif groups
  • 26 three-way junctions
More

3D Redundancy

6X7F has chains which belong to the following equivalence classes in the current representative set:

Similar structures

5L4O 5U4I 6BU8 7JT2 6BU8 5MDY 5WE6 5WFK 5WFK 5UQ7 7K51 6WDK 6WDK 6BUW 6OXI 6OXI 5U4I 5WE6 5LZD 6OXA 6WDG 6OFX 2FMT 6YEF 6WD1 2FMT 6OXA 7K50 7K52 7ZHG 6OGI 3JCE 6OG7 6WDF 5ZEP 7K50 5ZEB 6WDM 6WD3 6WD8 6WDJ 6WD9 6WD4 6WD4 5ZEU 6WD2 7JT3 6VYS 6VYQ 6XDQ 6VU3 6XDQ 6VYS 6VYQ 6VU3 6WD9 6WDL 6WD8 7JSS 5UYL 6WD2 6WDM 5UYL 6WD5 6ZTJ 6ZTM 6WD5 6BUW 6WD3 5LZA 5WF0 5WF0 7JSZ 6WDJ 6WD6 6WDL 6DNC 8AP4 7ST6 5J3C 6OTR 6OTR 6OTR 6X7K 6X7K 6ORD 5MDV 6OTR 6ORD 6BZ6 6ZTP 6ZU1 6ZTO 7NHL 5WE4 7PJV 6ORE 7MSZ 7TOQ 6H4N 6WD0 6WDE 6WD0 7ST6 7UNU 7UNR 8B7Y 5H5U 7ZAG 5J3C 5WDT 5WFS 5WDT 5WFS 6OPE 6OPE 7PJY 5WE4 6X6T 6OJ2 6OF6 6WDD 6C4I 6C4I 6OXA 6OXA 7MSH 5J30 5J30 6OF6 6OJ2 5MDZ 7ZAI 7JT1 7K55 6X6T 6BZ6 5MDW 7NBU 5U9G 7K53 6WNW 5UYM 5U9F 7ST7 7K54 6WDD 5UQ8 5U9G 5U9F 5UYM 7LV0 7SSN 7K53 7SSO 7SSD 6XDR 5JB3 7PJX 4V69 6VZ7 6VYW 6VYU 6XII 6VYW 6VYU 6VZ7 6XII 4V7B 3J5S 6H58 6H58 6XIJ 6XIJ 5JBH 6SW9 5LMS 6YTF 6X9Q 6X9Q 5U4J 5LZC 6XGF 6XGF 5LZB 8FIZ 5LMV 3JBO 5LMQ 7PJZ 7PJT 3J77 3J78 3J78 6VZ5 6VZ3 4V6N 5ZEY 4V72 4V6S 4V6P 6VYT 6VYT 5ME1 4V6O 4V79 4V73 5ME0 4V70 4V74 4V77 4V76 4V71 4V75 4V6Z 4V6Y 6VZ3 6VZ5 7PJU 4V6V 6VYY 6VYZ 6VYX 6VYY 6VYX 6VYZ 6VZ2 6VZ2 4V6T 3DEG 4V6R 4V6Q 1EG0 4V78 6XDR 6DNC 6YSI 6ORL 6VYR 6VYR 6NDK 6BZ7 5KPW 5KPS 5UYK 5UYP 6GXN 6WD7 5UYK 5UYP 7SS9 6GXO 6NDK 6BZ8 6BZ8 7SSL 6WD6 6OSQ 6OSK 6SWC 7ZKI 5L3P 3JCJ 6BZ7 6Q95 6WDA 7JSW 5UYQ 6GXM 5UYQ 6GWT 6WDA 7SSW 5KPX 6WD7 6VZJ 6VZJ 6ZTL 6WDC 6O7K 6WDC 6ZTN 6OGG 6OT3 6WDH 6WDH 5KPV 6OST 5LMU 6YS5 5LZF 3JCN 5KPX 6BZ8 5KPV 5KPS 6OGF 3J9Y 5UYN 5UYN 6WDI 6WDB 6WDI 6O9K 5IQR 6BZ7 6WDB 5KPW 6OUO 6BZ8 6BZ7 7PJW 3JBN 6XQD 4V9S 6ND5 8CVJ 8CVL 5E7K 7RQ9 1VY7 4Z3S 1VY4 4W2F 1VY5 4YZV 4WPO 4V51 4V8Q 7JQL 7U2I 4W2I 5HD1 6QNQ 6XHV 5IB8 4V9S 4Y4P 4W2G 4WR6 6O97 8CVJ 4WR6 3CW5 5EL4 5HCP 5DOY 4ZER 5WIT 4W4G 5EL5 8CVL 4ZSN 4Z3S 4ZER 6UO1 6UO1 4ZSN 1VY6 4WQY 5DOY 4WRO 5WIT 4V8F 5F8K 4V5C 4V87 7OSM 4WZO 4TUC 1VY6 7JQM 4Y4P 7JQM 4YPB 7JQL 4W4G 4V9R 4WZO 7RQ9 5EL4 4V9R 4W2F 5WIS 4WRO 4V8E 4V51 6ND6 4V5C 6O97 6ND6 5E7K 5HCQ 6XHY 5EL7 4WSD 4V8D 5IBB 6XHY 5J4B 4Z8C 4WSD 6CAE 4WT1 4WQR 5J4C 4WPO 5W4K 1VY4 6OF1 4WQ1 7U2J 5J4B 4V6G 4WQ1 5IBB 8EKB 6CAE 7U2J 4WQR 5HCQ 8EKB 4V5F 7OSA 7U2H 5IB7 4V8D 7RQ8 5HCR 4Z8C 4V6G 5DFE 5IB8 4W2G 6XQD 6ND5 4LNT 4W2H 4V7M 5W4K 4YZV 8CVK 7U2H 4V5F 5DFE 4WRA 6XHW 4WRA 5EL6 4WT1 5EL6 5IB7 6QNQ 6XHW 4W2H 7RQ8 5HCR 5EL7 5HD1 4LNT 5HCP 6OF1 8CVK 5HAU 5J4C 7U2I 4W2I 6XHV 5WIS 5HAU 4V97 4V5K 3V11 4YPB 4YPB 4V4Z 4V8Q 4V4X 6GSJ 6GSJ 4V6A 4V6A 6GSL 6GSL 6BOH 6BOH 6BOH 6BOH 4V5K 4V67 4V8J 4V8B 4V87 7CHD 6QNQ 7CHD 4W4G 4W4G 4V87 4V63 4V8B 4V67 4V63 5D8B 4V8J 4V6G 4V8O 5D8B 8B0X 8AYE 7UNV 8EKC 7NWT 6AZ1 7ZAH 8CRX 7TOR 7ST2 8AM9 7P7R 6Y69 7M5D 7NHN 7TOR 7MSC 5AFI 5AFI 8CVM 7MT3 7MSM 7K00 6XZ7 8EIU 8EIU 7TOP 8G6X 7SA4 7SA4 6XZB 7UG7 7KGB 7TOO 7UNW 7MT7 7MT7 7MT2 6XZA 6WDE 4V8C 1VY5 6XQE 4TUB 4V7L 6N9E 4V7P 4V8B 4TUB 4V7L 4TUD 4LT8 4P6F 6N9E 4P70 4V8C 6N9F 4V5K 5F8K 4V67 6GSK 4TUA 4YPB 4V8B 4P6F 4LT8 4V87 4V8C 4TUC 5EL5 4V7M 4V5F 4V8E 4V5F 4TUA 6XQE 7LH5 4V9I 7LH5 4V7P 4V67 3CW6 3QSY 4L71 6QNQ 5D8B 6B4V 4V97 4LEL 4V6G 4V8C 4WZO 4L71 6B4V 5D8B 6B4V 4V5K 6B4V 4LFZ 1VVJ 4V63 4P70 4TUD 1VVJ 6QNQ 4WQY 1VY7 6N9F 5CZP 6GSK 5CZP 4V9I 4V8F 4LSK 4V6G 4V63 4LFZ 4LSK 4LEL
Structures from NR_all_35542.111
BGSU RNA Site //