7OHW Summary
- Structure Title
- 7OHW Summary
- Authors
- Milkereit, P., Poell, G.
- Release Date
- 2021-11-03
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
- Chains
-
- 0 RNA chain from synthetic
- 40 other chains
- Compounds
- 25S rRNA, 5.8S rRNA, Protein MAK16, Ribosomal RNA-processing protein 1, Ribosome biogenesis protein NSA1, ITS2, Ribosome biogenesis protein BRX1, 60S ribosomal protein L3, 60S ribosomal protein L4-A, ATP-dependent RNA helicase HAS1, 60S ribosomal protein L6-A, 60S ribosomal protein L7-A, 60S ribosomal protein L8-A, 60S ribosomal protein L9-A, rRNA-processing protein EBP2, Proteasome-interacting protein CIC1, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, 60S ribosomal protein L15-A, 60S ribosomal protein L16-A, 60S ribosomal protein L17-A, 60S ribosomal protein L18-A, 60S ribosomal protein L20-A, 60S ribosomal protein L23-A, Ribosome assembly factor MRT4, 60S ribosomal protein L26-A, Nucleolar GTP-binding protein 1, 60S ribosomal protein L32, 60S ribosomal protein L33-A, 60S ribosomal protein L35-A, 60S ribosomal protein L36-A, 60S ribosomal protein L37-A, Ribosome biogenesis protein ERB1, Pescadillo homolog, Ribosome biogenesis protein 15, Ribosome biogenesis protein NSA2, Ribosome biogenesis protein RLP7, Nucleolar protein 16, Ribosome production factor 1, Eukaryotic translation initiation factor 6
Pairwise Interactions
Interactions annotated by FR3D:- 641 base-pairs
- 1,663 base-stacking
- 684 base-phosphate
- 73 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7OHW contains:- 66 internal loops from 0 motif groups
- 40 hairpin loops from 0 motif groups
- 6 three-way junctions
3D Redundancy
7OHW has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_90506.49 (1)
- NR_20.0_18489.8 (1)
- NR_3.5_90506.49 (1)
- NR_3.5_18489.8 (1)
- NR_4.0_90506.49 (1)
- NR_4.0_18489.8 (1)
- NR_all_90506.49 (1)
- NR_all_18489.8 (1)
Similar structures
5TBW 6N8J 6QTZ 5APO 6N8K 6N8L 6R84 6SV4 6SV4 6SV4 6OIG 4U56 4U56 6T83 5JUO 5JUT 6T83 5JUU 6GQB 5MC6 7NRC 6N8N 7OH3 4U53 4U50 6M62 5H4P 6R87 4U50 4U55 4U51 4U51 6S47 6Z6K 6Z6J 6N8O 6N8M 4U53 6QT0 6HD7 5JUP 7OF1 6RI5 6R86 4U4Y 5FL8 3J6Y 7OHS 6EM4 6C0F 6I7O 6I7O 7OHR 7OHP 3J6X 3J77 5JCS 4V6I 4V7F 4V8T 4V8Z 5Z3G 6CB1 7OHT 3J78 7OHY 7OHU 4U4O 6YLY 5T6R 5APN 6XIQ 6ELZ 5JUS 6FT6 6GQV 4U4O 7NRD 6EM3 6EM5 6EM1 7OHV 7OHX 5GAK 6YLX 6GQ1 4V8Y 6S05 6WOO 5DGE 5DGV 5DAT 5DGV 5DAT 4V7R 4V7R 5TGM 5TGM 5TGA 5DGF 7MPJ 7TOO 6T4Q 7TOP 5DC3 5DC3 5DGE 5DGF 5TGA 5NDG 5NDG 6HHQ 6HHQ 5MEI 5MEI 5I4L 5I4L 7OSA 4V88 4V88 5OBM 5OBM 5NDW 5NDW 5NDV 7OSM 5ON6 5LYB 5ON6 5NDV 5LYB 5TBW 4U55 6TNU 4U4N 5M1J 6XIR 7B7D 6QIK 4U6F 6T7T 4U6F 4U4Z 4U4N 4U3N 3JCT 4U4Y 4U3N 7BTB 7BT6 6T7I 6RZZ 4U4Z 6YLH 7OHQ 5T62 7MPI 7N8B 4U3U 4U3U 4U4R 4U4R 7AZY 6SNT 4U3M 6YLG 6Q8Y 7RR5 4U52 4U52 4U4U 4U4Q 4U4U 4U3M 4U4Q 6TB3Structures from NR_all_90506.49